Gene expression and viral prodution in latently infected, resting CD4⁺ T cells in viremic versus aviremic HIV-infected individuals

Abstract

The presence of HIV-1 in latently infected, resting CD4⁺ T cells has been clearly demonstrated in infected individuals; however, the extent of viral expression and the underlying mechanisms of the persistence of HIV-1 in this viral reservoir have not been fully delineated. Here, we show that resting CD4⁺ T cells from the majority of viremic patients are capable of producing cell-free HIV-1 spontaneously ex vivo. The levels of HIV-1 released by resting CD4⁺ T cells were not significantly reduced in the presence of inhibitors of cellular proliferation and viral replication. However, resting CD4⁺ T cells from the majority of aviremic patients failed to produce virions, despite levels of HIV-1 proviral DNA and cell-associated HIV-1 RNA comparable to viremic patients. The DNA microarray analysis demonstrated that a number of genes involving transcription regulation, RNA processing and modification, and protein trafficking and vesicle transport were significantly upregulated in resting CD4⁺ T cells of viremic patients compared to those of aviremic patients. These results suggest that active viral replication has a significant impact on the physiologic state of resting CD4⁺ T cells in infected viremic patients and, in turn, allows release of HIV-1 without exogenous activation stimuli. In addition, given that no quantifiable virions were produced by the latent viral reservoir in the majority of aviremic patients despite the presence of cell-associated HIV-1 RNA, evidence for transcription of HIV-1 RNA in resting CD4⁺ T cells of aviremic patients should not necessarily be taken as direct evidence for ongoing viral replication during effective therapy.

• HIV‖latency‖viremia‖DNA microarray