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Published online on October 27, 2005, 10.1073/pnas.0507960102
PNAS | November 8, 2005 | vol. 102 | no. 45 | 16164-16169


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BIOCHEMISTRY
The eukaryotic initiation factor (eIF) 5 HEAT domain mediates multifactor assembly and scanning with distinct interfaces to eIF1, eIF2, eIF3, and eIF4G

Yasufumi Yamamoto * {dagger}, Chingakham Ranjit Singh * {dagger}, Assen Marintchev {ddagger}, Nathan S. Hall *, Ernest M. Hannig §, Gerhard Wagner {ddagger}, and Katsura Asano *, ¶

*Molecular Cellular Developmental Biology Program, Division of Biology, Kansas State University, Manhattan, KS 66506; {ddagger}Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115; and §Department of Molecular and Cell Biology, University of Texas at Dallas, Richardson, TX 75083

Communicated by Charles C. Richardson, Harvard Medical School, Boston, MA, September 12, 2005 (received for review July 20, 2005)

Eukaryotic translation initiation factor (eIF) 5 is crucial for the assembly of the eukaryotic preinitiation complex. This activity is mediated by the ability of its C-terminal HEAT domain to interact with eIF1, eIF2, and eIF3 in the multifactor complex and with eIF4G in the 48S complex. However, the binding sites for these factors on eIF5–C-terminal domain (CTD) have not been known. Here we present a homology model for eIF5-CTD based on the HEAT domain of eIF2B{epsilon}. We show that the binding site for eIF2{beta} is located in a surface area containing aromatic and acidic residues (aromatic/acidic boxes), that the binding sites for eIF1 and eIF3c are located in a conserved surface region of basic residues, and that eIF4G binds eIF5-CTD at an interface overlapping with the acidic area. Mutations in these distinct eIF5 surface areas impair GCN4 translational control by disrupting preinitiation complex interactions. These results indicate that the eIF5 HEAT domain is a critical nucleation core for preinitiation complex assembly and function.

general amino acid control | ribosome preinitiation complex | translation initiation | translational control


Author contributions: G.W. and K.A. designed research; Y.Y., C.R.S., A.M., and N.S.H. performed research; A.M. analyzed data; E.M.H. contributed new reagents/analytic tools; and K.A. wrote the paper.

Conflict of interest statement: No conflicts declared.

Abbreviations: eIF, eukaryotic initiation factor; AA box, aromatic/acidic box; K box, lysine box; CTD, C-terminal domain; MFC, multifactor complex; TC, ternary complex; uORF, upstream ORF; Gcd, general control derepressed; Gcn, general control nonderepressible; FL, FLAG; HA, hemagglutinin; Ts, temperature sensitive; 3AT, 3-aminotriazole.

{dagger} Y.Y. and C.R.S. contributed equally to this work.

To whom correspondence should be addressed. E-mail: kasano{at}ksu.edu.

© 2005 by The National Academy of Sciences of the USA


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