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BIOLOGICAL SCIENCES / BIOPHYSICS
Intramolecular domain–domain association/dissociation and phosphoryl transfer in the mannitol transporter of Escherichia coli are not coupled

Jeong-Yong Suh, Junji Iwahara, and G. Marius Clore^*

Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892-0520

Edited by Alan R. Fersht, University of Cambridge, Cambridge, United Kingdom, and approved January 11, 2007 (received for review October 17, 2006)

The Escherichia coli mannitol transporter (II^Mtl) comprises three domains connected by flexible linkers: a transmembrane domain (C) and two cytoplasmic domains (A and B). II^Mtl catalyzes three successive phosphoryl-transfer reactions: one intermolecular (from histidine phosphocarrier protein to the A domain) and two intramolecular (from the A to the B domain and from the B domain to the incoming sugar bound to the C domain). A key functional requirement of II^Mtl is that the A and B cytoplasmic domains be able to rapidly associate and dissociate while maintaining reasonably high occupancy of an active stereospecific AB complex to ensure effective phosphoryl transfer along the pathway. We have investigated the rate of intramolecular domain–domain association and dissociation in IIBA^Mtl by using ¹H relaxation dispersion spectroscopy in the rotating frame. The open, dissociated state (comprising an ensemble of states) and the closed, associated state (comprising the stereospecific complex) are approximately equally populated. The first-order rate constants for intramolecular association and dissociation are 1.7 (±0.3) x 10⁴ and 1.8 (±0.4) x 10⁴ s^–1, respectively. These values compare to rate constants of 500 s^–1 for A B and B A phosphoryl transfer, derived from qualitative line-shape analysis of ¹H-¹⁵N correlation spectra taken during the course of active catalysis. Thus, on average, 80 association/dissociation events are required to effect a single phosphoryl-transfer reaction. We conclude that intramolecular phosphoryl transfer between the A and B domains of II^Mtl is rate-limited by chemistry and not by the rate of formation or dissociation of a stereospecific complex in which the active sites are optimally apposed.

domain motion | NMR | protein dynamics | relaxation dispersion | phosphotransferase system

The authors declare no conflict of interest.

This article is a PNAS direct submission.

This article contains supporting information online at www.pnas.org/cgi/content/full/0609103104/DC1.

*To whom correspondence should be addressed. E-mail: mariusc{at}intra.niddk.nih.gov

© 2007 by The National Academy of Sciences of the USA

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