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Published online on March 4, 2008, 10.1073/pnas.0709295105
PNAS | March 11, 2008 | vol. 105 | no. 10 | 3751-3756


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BIOLOGICAL SCIENCES / BIOCHEMISTRY
Analyses of Mlc–IIBGlc interaction and a plausible molecular mechanism of Mlc inactivation by membrane sequestration

Tae-Wook Nam*, Ha Il Jung{dagger},{ddagger}, Young Jun An{dagger},{ddagger}, Young-Ha Park*, Sang Hee Lee{ddagger}, Yeong-Jae Seok*,§, and Sun-Shin Cha{dagger},§

*Department of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 151-742, Korea; {dagger}Marine Biotechnology Center, Korea Ocean Research and Development Institute, Ansan 426-744, Korea; and {ddagger}Department of Biological Sciences, Myongji University, Yongin 449-728, Korea

Edited by Winfried Boos, University of Konstanz, Konstanz, Germany, and accepted by the Editorial Board January 22, 2008 (received for review September 30, 2007)

In Escherichia coli, glucose-dependent transcriptional induction of genes encoding a variety of sugar-metabolizing enzymes and transport systems is mediated by the phosphorylation state-dependent interaction of membrane-bound enzyme IICBGlc (EIICBGlc) with the global repressor Mlc. Here we report the crystal structure of a tetrameric Mlc in a complex with four molecules of enzyme IIBGlc (EIIB), the cytoplasmic domain of EIICBGlc. Each monomer of Mlc has one bound EIIB molecule, indicating the 1:1 stoichiometry. The detailed view of the interface, along with the high-resolution structure of EIIB containing a sulfate ion at the phosphorylation site, suggests that the phosphorylation-induced steric hindrance and disturbance of polar intermolecular interactions impede complex formation. Furthermore, we reveal that Mlc possesses a built-in flexibility for the structural adaptation to its target DNA and that interaction of Mlc with EIIB fused only to dimeric proteins resulted in the loss of its DNA binding ability, suggesting that flexibility of the Mlc structure is indispensable for its DNA binding.

enzyme IICBGlc | glucose signaling | protein–protein interaction | transcription regulation


Author contributions: T.-W.N., H.I.J. and Y.J.A. contributed equally to this work; Y.-J.S. and S.-S.C. designed research; T.-W.N., H.I.J., Y.J.A., and Y.-H.P. performed research; S.H.L. contributed new reagents/analytic tools; T.-W.N., Y.-J.S., and S.-S.C. analyzed data; and Y.-J.S. and S.-S.C. wrote the paper.

The authors declare no conflict of interest.

This article is a PNAS Direct Submission. W.B. is a guest editor invited by the Editorial Board.

Data deposition: The atomic coordinates of the Mlc/EIIB complex and the S-EIIB protein have been deposited in the Protein Data Bank, www.pdb.org (PDB ID codes 3BP8 and 3BP3, respectively).

This article contains supporting information online at www.pnas.org/cgi/content/full/0709295105/DC1.

Very recently, the C-terminal amino acid (Gly406) of Mlc has been revealed to be involved in interacting with EIIB (26), which gives experimental support to our observation.

§To whom correspondence may be addressed. E-mail: yjseok{at}snu.ac.kr or chajung{at}kordi.re.kr

© 2008 by The National Academy of Sciences of the USA


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