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IMMUNOLOGY
A phosphorylation site in Bruton's tyrosine kinase selectively regulates B cell calcium signaling efficiency by altering phospholipase C-
activation
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*Department of Microbiology, Immunology, and Molecular Genetics and Howard Hughes Medical Institute, Departments of ¶Chemistry and Biochemistry and ||Biological Chemistry, **Molecular Biology Institute,
Biocybernetics Laboratory, and
Biomedical Engineering Interdepartmental Program, University of California, Los Angeles, CA 90095; and
Department of Microbiology and Immunology, Wake Forest University Health Sciences, WinstonSalem, NC 27157
Contributed by Owen N. Witte, August 13, 2004
| Abstract |
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Loss of function of Bruton's tyrosine kinase (Btk) causes X-linked agammaglobulinemia (XLA) in humans and X-linked immunodeficiency in mice (xid). By using MS analysis and phosphopeptide-specific antibodies, we identified a tyrosine phosphorylation site (Y617) near the carboxyl terminus of the Btk domain from Btk expressed in 293T as well as DT-40 cells. Y617 is conserved in all Tec family kinases except murine Tec. Replacement of Y617 with a negatively charged glutamic acid (E) suppressed Btk-mediated phospholipase C
2 activation and calcium response in DT-40 cells, whereas Akt activation was not affected. The Btk Y617E mutant could partially restore conventional B cell development and proliferation in Btk/Tec mice but failed to rescue CD5+ B-1 cell development and the TI-II immune response to 2,4,6,-trinitrophenyl-Ficoll. These data suggest that Y617 phosphorylation or a negative charge at this site may down-regulate the function of Btk by selectively suppressing the B cell calcium signaling pathway.
Tec family kinases play important roles in lymphocyte development and function (4, 5). Bruton's tyrosine kinase (Btk), a member of this family, is required for both the initial calcium release and extracellular calcium entry (6, 7). Btk not only regulates the production of phosphatidylinositol 4,5-bisphosphate (8) but also phosphorylates critical tyrosine residues on PLC, resulting in activation of PLC
2 (9). B cells lacking Btk show a blunted calcium response after BCR stimulation (7, 10).
Btk is expressed in multiple lineages within the hematopoietic system, however, Btk plays an indispensable role only in B cell development and function (11). Mutations in Btk cause human X-linked agammaglobulinemia (XLA), characterized by a dramatic reduction in peripheral B cells (12, 13). A spontaneous point mutation in murine Btk (R28C) results in a milder condition, termed X-linked immunodeficiency (xid) (14, 15). Btk-deficient mice show a similar phenotype as the xid animals: peripheral B cells are reduced by 3050%, and these cells proliferate to a lesser extent than normal B cells when stimulated in vitro. Additionally, serum levels of IgM and IgG3 are lower in these mice. Other defects include the absence of CD5+ B-1 cells and the inability to respond to type II T-independent antigens (1618).
Btk and other Tec kinases share a similar domain structure with Src and Abl family kinases. All have a Src homology 3 (SH3) domain followed by an SH2 domain and a kinase domain. The significance of tyrosine phosphorylation in the regulation of Src and Abl family kinases has been studied extensively (19, 20). Phosphorylation has also been shown to be a critical regulatory mechanism for controlling Btk function. Y551 lies within the activation loop of Btk, and phosphorylation at this site by Lyn activates the kinase. Y223 in the SH3 domain is an autophosphorylation site that potentially down-regulates Btk activity, and S180 in the Tec homology domain (TH domain) negatively regulates Btk function when phosphorylated by protein kinase C-
(14, 21, 22).
We conducted MS analysis on purified murine Btk from 293T cells and DT-40 cells to search for new phosphorylation sites. A number of potential phosphorylation sites were found in the carboxyl terminus of the kinase domain, but most did not affect Btk function when mutated. However, Y617 was discovered to be a phosphorylation site that regulates Btk-mediated calcium signaling. When replaced by glutamic acid (Y617E) to mimic the phosphorylated state, a decreased calcium response but normal Akt activation was observed after BCR stimulation. The Y617E mutant could partially rescue defects in B cell development and function, suggesting that phosphorylation or a negatively charged modification at this site may selectively inhibit Btk's function in B cell development and activation.
| Materials and Methods |
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-amphotropic packaging plasmid. WT murine Btk and the mutants were cloned into the NotI site of retroviral vector murine stem cell virusinternal ribosome entry sequenceGFP. Point mutations were introduced by using the QuickChange Site-Directed Mutagenesis Kit (Stratagene). Protein Purification and MS Analysis. His-tagged Btk was purified with a Ni-NTA-agarose column (Qiagen). The purified fractions were separated by SDS/PAGE and stained with Coomassie blue. Gel slices were washed and digested, and the resulting tryptic peptides were extracted by using the standard protocols in ref. 24. Trypsin digestion, extraction, and peptide spotting onto a matrix-assisted laser desorption ionization (MALDI) target were accomplished by using a robotic liquid handling workstation (MassPrep, Micromass-Waters, Beverly, MA). Peptide fingerprint mass spectra were acquired with a MALDI time-of-f light instrument (M@LDI-R, Micromass-Waters) and searched against rodent proteins in the SWISS-PROT protein sequence database by using the MASCOT search program (www.matrixscience.com).
Phosphopeptide-Specific Antibody Generation. Phosphopeptide (residue 610624 with a phosphate on Y617) was synthesized at Synpep (Dublin, CA), conjugated to keyhole limpet hemocyanin, and used to immunize rabbits (Covance, Denver, PA). Serum was first absorbed with BSA peptide 610624 without phosphorylation to remove peptide-specific antibodies and then purified through a BSA-phosphopeptide column.
Immunoprecipitation and Western Blot Analysis. The following antibodies were used in this study: Btk N-terminal antibody was produced as described in ref. 13; PLC
2 antibody, 4G10, Akt, and phospho-Akt antibodies were purchased from Santa Cruz Biotechnology, Upstate Biotechnology (Lake Placid, NY), and New England Biolabs, respectively; mouse anti-chicken IgM M4 was obtained from Southern Biotechnology Associates; and goat anti-mouse IgM F(ab')2 was purchased from Jackson ImmunoResearch. Cells were lysed in a buffer containing 1% Triton X-100, 50 mM Tris (pH 8.0), 150 mM NaCl, and Complete protease inhibitors (Roche Diagnostics). Immunoprecipitation, Western transfer, and Western blotting were performed by using standard techniques.
Calcium Flux Analysis. DT-40 cells were labeled with 1 µM Indo-1AM (Molecular Probes) for 3045 min at 37°C, and calcium flux was measured by using a fluorimeter (SLM 8000, OLIS, Bogart, GA).
Reconstitution of Btk/Tec Mice. Btk/Tec mice were generously provided by Wilfried Ellmeier (Institute of Immunology, Medical University of Vienna, Vienna). For reconstitution, 5-fluorouracil-treated bone marrow cells were collected at day 3 and stimulated with IL-3, IL-6, and SCF for 48 h. The cells were then injected (i.v.) into lethally irradiated Btk/Tec mice (1,100 rad) at 1 x 106 cell per mouse after two rounds of spin infection (25, 26).
Fluorescence Activated Cell Sorting (FACS) Analysis. Single-cell suspensions from spleen and peritoneal wash were depleted of red blood cells and stained with the following antibodies: IgM-PE (Pharmingen) and IgD-biotin (Southern Biotechnology Associates), followed by streptavidin-APC (Caltag, South San Francisco, CA) and CD5-APC (Pharmingen). Data were acquired on a FACScan (Becton Dickinson) and analyzed by using WINMDI software (Scripps Research Institute, La Jolla, CA).
B Cell Proliferation and ELISA. B220+ splenocytes were purified by using a B cell isolation kit (Miltenyi Biotec, Auburn, CA), and the resulting purity was >93%. The B cell proliferation assay, serum immunoglobulins, and 2,4,6,-trinitrophenyl-specific immunoglobulins were measured as described in ref. 27.
| Results |
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2 after BCR stimulation with kinetics similar to those seen in the WT Btk response (data not shown).
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Although overexpression in 293T cells results in large quantities of Btk, the intracellular environment of these cells does not reflect the in vivo environment of Btk. To confirm the phosphorylation data from 293T cells, we purified His-tagged Btk from DT-40 cells. To eliminate contaminating proteins that are more abundant in DT-40 cells, we engineered a 10x His-tagged Btk. The 10x His-tagged Btk, like the 6x His-tagged Btk, is functional and can be purified from DT-40 cells at a purity sufficient for MS analysis (Fig. 1C and data not shown).
Multiple Phosphorylation Sites Were Identified in the C Terminus of the Btk Domain. Matrix-associated laser desorption ionization MS identified putative phosphorylation sites throughout the Btk protein sequence, including Y551, a known phosphorylation site. Interestingly, a number of potential phosphorylation sites were clustered in the carboxyl terminus of the kinase domain. Most of these potential sites appeared only in Btk of 293T origin, suggesting that they could be artifacts of overexpression and coexpression of Lyn (data not shown). Two putative phosphopeptides were identified in multiple samples of Btk isolated from both 293T cells and DT-40 cells: 616LYRPHLASER625 and 626VYTIMYSCWHEK637 (Fig. 1D). Although more than one tyrosine/serine/threonine can be found in each sequence, both singly and doubly phosphorylated peptides were identified for peptide 616625 in 293T cells (data not shown), indicating that both Y617 and S623 were subject to phosphorylation. Among these potential phosphorylation sites, only mutation of Y617 caused a major functional defect in Btk signaling as discussed below. Therefore, we focused our study on the regulation of Btk function by means of Y617 phosphorylation.
Phosphopeptide-Specific Antibody Confirms Tyrosine Phosphorylation at Y617, Which Is Conserved in Tec Family Kinases. To gain insight into the significance of Y617 phosphorylation, we examined the conservation of this residue in nonreceptor tyrosine kinases. Multiple sequence alignment showed that this tyrosine and the surrounding residues are highly conserved in both murine and human Tec family kinases, with the exception of murine Tec (Fig. 2A). The substitution of histidine for tyrosine in murine Tec is found in various splicing forms (32). Additionally, analogous sites are not found in Syk, Abl, or Src family kinases, suggesting that potential phosphorylation of Y617 might be a regulatory mechanism unique to Tec family kinases.
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Btk Y617E Is Selectively Defective in Mediating Calcium Response. We decided to alter Y617 to investigate its function as a phosphorylation site. Two common methods used to perturb a phosphorylation site are phenylalanine (F) mutation to block phosphorylation and glutamic acid/aspartic acid (E/D) mutation to mimic the phosphorylated residue (34). Although both Y617F and Y617E mutants showed WT kinase activity in vitro for autophosphorylation and for transphosphorylation of enolase (data not shown), the Y617F mutant exhibited a calcium responses similar to WT Btk after anti-BCR stimulation, whereas the Y617E mutant showed a decreased response (Fig. 3A). This finding indicates that there is a defect in mediating the calcium signal when the Btk Y617 site is negatively charged. To confirm these results, we also checked PLC
2 activation. Tyrosine phosphorylation of PLC
2 after BCR stimulation was significantly attenuated in the Y617E mutant, and no change in phosphorylation status was observed in the Y617F mutant (Fig. 3B), consistent with the calcium flux data.
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Y617E Partially Rescues B Cell Development and Function in Btk/Tec Mice. Although the BCR signaling pathway in DT-40 cells, murine, and human B cells share many elements, DT-40 cells are different in that they are a transformed cell line, and the cells continuously divide. Although Akt activation is dependent on Btk in DT-40 cells, this is not the case in murine splenocytes (39). Therefore, we used a mouse model to study the effect of the Btk Y617 mutants on B cell development and activation. Yu et al. (40) developed an effective bone marrow reconstitution system in Btk/Tec mice by using a retroviral vector to deliver genes of interest. Following this protocol, Btk/Tec mice were reconstituted with either a vector control, WT Btk, or the Y617 mutants (Fig. 4A). After reconstitution, comparable levels of GFP-positive cells (3040% in the spleen), an indication of infection efficiency, were found in the periphery of these mice (data not shown).
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The ability of the rescued cells to proliferate in response to stimulation was also tested. Splenic B cells were purified and stimulated with anti-IgM or LPS. As shown in Fig. 5A, vector-infected cells did not proliferate in response to anti-IgM stimulation and exhibited a minimal response to LPS stimulation, whereas WT Btk and the Y617F mutant infected cells showed robust proliferation in response to both stimulations. However, the Y617E mutant-infected cells exhibited minimal proliferation to high anti-IgM stimulation and moderate proliferation in response to LPS stimulation. These data demonstrate that the Y617E mutation in Btk partially limits B cell activation.
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| Discussion |
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Y617 Phosphorylation Selectively Suppresses the Calcium Response Mediated by Btk. Y617 phosphorylation was first identified by MS analysis from 293T and DT-40 cells and then confirmed by phosphopeptide-specific antibody in 293T cells. However, we have not been able to detect Y617 phosphorylation in DT-40 cells and primary murine B cells with this pY617 antibody. Because Btk in 293T cells was highly overexpressed (
10-fold of DT-40 cells and 100-fold over primary B cells), this failure is possibly due to a low/labile phosphorylation in B cells or low sensitivity/specificity of the antibody. Further studies are needed to validate that this phosphorylation occurs at physiologic conditions and to investigate the mode of regulation of this phosphorylation. Nonetheless, the most striking property of Y617 phosphorylation as mimicked by a negative charge at this site is that it can selectively affect the downstream pathways of Btk. The Btk Y617E mutant fails to activate PLC
2 and calcium response in DT-40 cells but retains its capacity to mediate Akt activation. These findings suggest that Btk Y617 phosphorylation as mimicked by the Y617E mutation inhibits PLC
2 phosphorylation, possibly by changing Btk conformation or by altering proteinprotein interactions within B cells. Surprisingly, no PLC
2 phosphorylation was detected with Y617E mutant, whereas residual phosphorylation was present in Btk DT-40 cells (10), hinting at a possible role of Btk in scaffolding/assembly of the BCR signalosome that is disrupted by Y617 phosphorylation or the acidic mutation.
Y617 Phosphorylation or a Negative Charge at This Site Is Associated with a Reduction in Btk Function. Although Y617 phosphorylation was first identified in cells where Btk was coexpressed with activated Lyn, it is not Lyn-dependent because it was also identified in cells expressing Btk only. The Y617 phosphorylation was also identified by MS in DT-40 cells with and without stimulation (data not shown). These data suggest that Y617 phosphorylation may correlate with an inactive Btk, and mutagenesis studies provide corroborating evidence. The Y617E mutant mimics constitutively phosphorylated Btk and was unable to properly mediate a calcium response in DT-40 cells. In the Btk/Tec reconstitution system, the Y617E mutant only partially rescued B cell maturation and proliferation. These data suggest that the Y617E mutant is a potential loss-of-function mutant, supporting the hypothesis that Y617 phosphorylation is associated with a less active Btk. Mutations at residue Y617 have not been reported to cause X-linked agammaglobulinemia (42), possibly because such mutations may be neutral or cause a mild phenotype.
Murine Tec Lacks a Tyrosine at Position 617. A major difference between the murine Btk-deficient model and human X-linked agammaglobulinemia patients is that the murine phenotype is milder (43), and this is partially due to the compensation of murine Tec (41). The severity of the phenotype varies in both human and murine models as a result of genetic background. One of the genetic variations between human and mouse is that Y617 is conserved in human but not murine Tec (Fig. 2 A). We postulate that phosphorylation of Y617 down-regulates Btk function, and it is possible that an allelic variation at this site (Y617H) makes murine Tec more readily activated to compensate for the loss of Btk function.
Our study suggests that Y617 phosphorylation or a negative charge at this site selectively affects Btk function by inhibiting PLC
2 activation and calcium response. This conclusion provides insight into the mechanism of regulation of Btk and other Tec family kinases. Further studies may contribute to new therapeutic approaches to regulating these kinases.
| Acknowledgements |
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| Footnotes |
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Abbreviations: BCR, B cell receptor; Btk, Bruton's tyrosine kinase; PLC, phospholipase C.

To whom correspondence should be addressed. E-mail: owenw{at}microbio.ucla.edu.
© 2004 by The National Academy of Sciences of the USA
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