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Departments of * Neurology,
Contributed by Stanley B. Prusiner, July 21, 1997
Studies on the transmission of human (Hu) prions to transgenic (Tg)
mice suggested that another molecule provisionally designated protein X
participates in the formation of nascent scrapie isoform of prion
protein (PrPSc). We report the identification of the site
at which protein X binds to the cellular isoform of PrP
(PrPC) using scrapie-infected mouse (Mo) neuroblastoma
cells transfected with chimeric Hu/MoPrP genes even though protein X
has not yet been isolated. Substitution of a Hu residue at position 214 or 218 prevented PrPSc formation. The side chains of these
residues protrude from the same surface of the C-terminal Many lines of evidence have converged to argue persuasively that
prions are composed largely, if not exclusively, of the scrapie isoform
of prion protein (PrPSc) (1). The discovery that mutations
in the PrP gene cause inherited prion disease in humans (2), which is
transmissible to laboratory animals (3-5), and the generation of
infectious prions in transgenic (Tg) mice expressing mutant PrP assert
that prions are devoid of nucleic acid (6-8). Furthermore, the recent
demonstration that prion diversity can be enciphered in the
conformation of PrPSc no longer demands a scrapie-specific
nucleic acid to explain the existence of strains of prions (9, 10)
That the cellular isoform of PrP (PrPC) interacts
with PrPSc during the formation of nascent
PrPSc was surmised from Tg mouse studies where mice
expressing a Syrian hamster (SHa) PrP transgene were susceptible to SHa
prions (11). When similar Tg mice were produced expressing human (Hu)
PrP, no transmission of Hu prions was found. However, mice expressing a
chimeric Hu/MoPrP transgene denoted MHu2M were susceptible to Hu
prions. In addition, we found that Tg mice expressing HuPrP did become
susceptible to Hu prions when they were crossed with PrP-deficient
(Prnp0/0) mice. These data taken together argued that it is
likely that a molecule other than PrP is involved in the formation of
PrPSc. We assumed that this molecule is a protein and
designated it "protein X" (5). Based on the results with the
MHu2M transgene and earlier studies showing that the N terminus of PrP
is not required for PrPSc formation (12), we surmised that
the binding of PrPC to protein X is likely to occur through
specific side chains of amino acids located at the C terminus of
PrPC.
Using scrapie-infected mouse neuroblastoma (ScN2a) cells
transfected with a chimeric PrP gene in which the Mo C terminus was replaced by Hu residues, we identified the binding site for protein X. Substitution of a Hu residue at position 214 or 218 prevented mouse
(Mo) PrPC from being converted into PrPSc. The
side chains of residues 214 and 218 protrude from the same surface of
the C-terminal Mouse neuroblastoma
(N2a) cells were obtained from American Tissue Culture Collection.
ScN2a cells are the persistently infected clones as described (13). All
the cells were grown and maintained at 37°C in minimal essential
medium supplemented with 10% fetal bovine serum. MHM2 PrP was constructed
as described (16). MHM2, MH2M, or MoPrP in pSPOX was digested with
BstEII and HindIII; then the 1.4-kbp fragment was
ligated into BstEII-HindIII double-digested Hu
or MHMHuA (Mo residues 214, 218, and 219 replaced with Hu) PrP in
pSPOX, yielding MHMHu(A/B) (combined replacements), MH2HuA and M3HuA.
MHMHu(A/B) in pSP72 was digested with XhoI and
StuI, then either the 2.4-kbp or the 880-bp fragment was
ligated to MHM2 in pSP72, yielding MHMHuA or MHMHuB (Mo residues 226, 227, 228, and 230 replaced with Hu), which were then introduced into the expression plasmid pSPOX.
To create MHM2 encoding specific amino acid changes,
BstEII and StuI or KpnI restriction
sites were introduced using mismatched oligonucleotides. After PCR,
amplified fragments were digested with restriction enzymes and then
ligated into the MHM2 PrP in the pSP72 vector. Subsequently the mutated
MHM2 PrPs were introduced into the expression plasmid pSPOX.
ScN2a cells were
transiently transfected with each construct using a DNA transfection
kit (DOTAP; Boehringer Mannheim). Cell lysis and Western blot analyses
were performed as described (16).
Cotransfection in which ScN2a cells were exposed simultaneously to two
different genes showed that transfected cells co-expressed the two
genes at an extremely high frequency (>85%) in 10-15% of total
ScN2a cells in which the transfection was successfully proceeded (data
not shown) (17). When equal amounts of two different DNAs cloned into
pSPOX were applied for the transfection as in the current experiments,
the expression levels of each molecule were equal by Western blot
analysis (data not shown).
Seven amino acids distinguish HuPrP from MoPrP at the C
terminus (residues 168-231). Four of these residues are close to the glycosylphosphatidylinositol anchor attached to Ser-231 whereas the
remaining three residues lie within the C-terminal Three
chimeric constructs, denoted as MHMHuA, MHMHuB, and MHMHu(A/B), were
transfected transiently into ScN2a cells. Neither MHMHu(A/B) nor
MHMHuA was converted into PrPSc as judged by the absence of
protease resistance (Fig.
1B). In contrast,
MHMHuB was converted into PrPSc as efficiently as the
control MHM2. We interpreted these results as indicating that Mo
protein X did not bind to MHMHu(A/B) or MHMHuA but did recognize
MHMHuB and MHM2, both of which were converted into PrPSc.
The mutant PrP molecules were all expressed at about the same level
(Fig. 1 A and D) and no inhibition of wt
MoPrPSc formation could be detected (Fig. 1 C
and F).
Having identified the HuA region that prevents conversion of modified
PrPC into PrPSc, we produced additional
constructs with Mo residues 214, 218, and 219 replaced by their Hu
counterparts. To test the replacement of these residues either alone or
in combination, we generated five constructs and expressed them in
ScN2a cells. Substitution of Hu residue 218 abolished PrPSc
(Fig. 1E, lanes 8, 9 and 11) whereas substitution of
Hu residue 219 was not inhibitory (Fig. 1E, lane 10).
Substitution of Hu residue 214 was partially inhibitory (Fig.
1E, lanes 7). Studies of chimeric PrPC
release from the cell surface with phosphatidylinositolphospholipase C
digestion revealed no topological changes (data not shown).
In
humans, position 219 corresponding to Mo 218 is polymorphic: in
Caucasians only Glu at this residue has been reported, whereas about
12% of the Japanese population have the Lys allele (21). The
substitution of Lys at Mo residue 218 abolished PrPSc
formation (Fig. 2, lane 4). To
examine the specificity of amino acid substitutions at position 218, we
introduced seven artificial mutations: Ile, Ala, Trp, Pro, Phe, Arg, or
His (Table 1). The constructs expressing
Ala, Pro, Phe, Arg, or His at position 218 were not converted into
PrPSc, whereas, low amounts of PrPSc were made
with Ile or Trp at residue 218 (Fig. 2B, lanes 5-8; data not shown).
Table 1.
Mutations in epitope tagged MHM2 PrP inhibit
PrPSc formation in ScN2a cells
Substitution of Hu Ile at residue 214 diminished but did not
completely abolish PrPSc formation (Fig.
2B, lane 11); similarly, modest PrPSc
formation was observed with Ala. No PrPSc was observed when
Lys, Glu, Trp, or Pro were substituted at position 214 (Fig.
2B, lanes 12-16). The mutant PrP molecules were all expressed at about the same level (Fig. 2A) except
when Pro was substituted at position 218, Arg at 216, or Pro at 214 (Table 1). Substitutions of Pro in the C-terminal Because only a minority of the ScN2a cells
express the mutant PrPs in these transient transfection experiments, we
could not assess the effect of expressing mutant PrP on conversion of
wt MoPrP into PrPSc (Figs. 1C and F
and 2C). To measure the influence of mutant PrP on the
conversion of wt PrP into PrPSc, we performed
cotransfection studies. Several studies have established that the
transfecting DNAs are generally taken up together and coexpressed.
Substitution of Glu, Ile, Pro, or Phe at residue 218 did not
inhibit conversion of epitope tagged wt MHM2 PrPC into
PrPSc (Fig. 2D, lanes 2, 3, 5, and 8; data not
shown). In contrast, Lys, Ala, Trp, Arg, or His at position 218 inhibited wt PrPSc formation (Fig. 2D, lanes 4, 6, and 7; data not shown). These results argue that MHM2 PrP with Lys,
Ala, Trp, Arg, or His at residue 218 binds to protein X with a greater
affinity than does wt MHM2 with Gln at 218 (Table 1). These findings
also contend that the two polymorphic Hu residues Glu and Lys interact
very differently with Mo protein X. Mutant MHM2 PrP(E218) binds more weakly to Mo protein X than does wt MHM2 PrP(Q218), which results in
MHM2 PrP(E218) not being converted into PrPSc and no
inhibition of the conversion of wt MHM2 PrPC into
PrPSc. In contrast, mutant MHM2 PrP(K218) binds more
tightly to Mo protein X than does wt MHM2 PrP(Q218), which results in
both MHM2 PrP(K218) not being converted into PrPSc and
inhibition of the conversion of wt MHM2 PrPC into
PrPSc.
The substitution of Lys, Ala, or Pro at residue 214 did not
inhibit conversion of epitope tagged wt MHM2 PrPC into
PrPSc (Fig. 2D, lanes 12, 14, and 16; data not
shown). In contrast, Ile, Glu, or Trp at position 214 inhibited wt
PrPSc formation (Fig. 2D, lanes 11, 13, and 15;
data not shown). These results argue that the MHM2 PrP carrying Ile,
Glu, or Trp at position 214 binds to protein X with a greater affinity
than does wt MHM2 with Val at position 214.
The side chain of MoPrP Gln at
residue 216 protrudes from the opposite face of the C-terminal
We introduced Arg at residue 216 in MHM2 PrP and MHM2 PrP(E218)
which contains the Hu Glu residue at 218. Neither of these mutant PrPs
acquired protease resistance when expressed in ScN2a cells (Fig.
2B, lanes 9 and 10). The Arg substitution at residue 216 inhibited conversion of epitope tagged wt MHM2 PrPC
into PrPSc (Fig. 2D, lane 9), whereas no
inhibition was observed if both residues 216 and 218 were mutated (Fig.
2D, lane 10). We interpret these findings as showing that
the Q Substitution of
Gln for Thr at MoPrP residue 215, Ala for Ser at Mo residue 221, or Lys
for Gln at Mo residue 222 did not inhibit conversion of these
epitope-tagged MHM2 PrP molecules into PrPSc when expressed
in ScN2a cells (Table 1). Coexpression of these mutant MHM2 PrPs with
wt MHM2 PrP did not inhibit wt PrPSc formation. When the
V214D mutation was introduced into MHM2 PrP(S221A), the protein was not
converted into PrPSc, suggesting that the V214D mutation
prevented binding to protein X.
The NMR
structure of SHa rPrP90-231 shows a loop composed of residues 165-171
immediately adjacent to the protein X binding site on the C-terminal
helix raising the possibility that one or more of these residues also
participate in the binding to protein X. To explore this possibility,
we constructed mutants MHM2 PrP(Q167R), MHM2 (Q167E), MHM2 PrP(S169N),
MHM2 PrP(N170S), and MHM2 PrP(Q171R) and transfected the DNAs into
ScN2a cells. MHM2 PrP(N170S) is equivalent to human polymorphism N171S
(25). MHM2 PrP(S169N) and MHM2 PrP(N170S) were converted into
PrPSc (Fig. 2B, lane 18; data
not shown), whereas MHM2 PrP(Q167R) and MHM2 PrP(Q171R) were not (Fig.
2B, lanes 17 and 19). MHM2(Q167E) exhibited less
efficient conversion with no inhibition of wt MHM2 PrPSc
formation (data not shown). The Asn or Ser substitutions at residues 169 or 170 did not inhibit conversion of epitope-tagged wt MHM2 PrPC into PrPSc (Fig. 2D, lane 18;
data not shown), whereas the Arg substitution at residues 167 or 171 inhibited PrPSc formation (Fig. 2D, lanes 17 and
19). These findings argue that Q167 and Q171 in MoPrP form a
discontinuous epitope with V214 and Q218 to which protein X binds.
The level of SHaPrPC expression in
Tg(SHaPrP)Prnp+/+ mice was directly proportional to the
length of the incubation time after inoculation with Mo prions (11). To
simulate these conditions in ScN2a cells, epitope-tagged MHM2 PrP was
coexpressed with SHaPrP or chimeric SHa/MoPrP. SHaPrP and chimeric
MH3 PrP (16) inhibited conversion of MHM2 PrP into PrPSc,
but this inhibition was relieved by substitution of Hu residues at
positions 214, 218, and 219, designated HuA (data not shown).
The foregoing findings help define the order of addition during
formation of the protein X/PrPC/PrPSc
complex as well as the limits of the central domain of PrP where PrPC and PrPSc interact. When Hu residues at
214, 218, and 219 (HuA) were introduced into MH2M or MH3 PrP, these
chimeric PrPs no longer inhibited the conversion of MHM2 PrP into
PrPSc (data not shown). Because the HuA substitutions
relieve inhibition by preventing the binding of the chimeric MH3HuA
PrP, we argue that the lack of conversion of SHaPrP or MH3 PrP into
PrPSc is not due to a low affinity for protein X. Instead,
MoPrPSc does not stimulate conversion of SHaPrP or MH3 PrP
into PrPSc even though these molecules are probably bound
to protein X. This contention is supported by the ability of
SHaPrPSc to stimulate conversion of SHaPrPC
into PrPSc in Tg(SHaPrP)PrP+/+ mice when
MoPrPC is coexpressed (11). From these data, it seems most
likely that PrPC binds first to protein X and the protein
X/PrPC complex then binds to PrPSc.
Because introduction of the HuA sequences into MH3 relieved the
inhibition of MHM2 PrP conversion into PrPSc, we conclude
that the protein X binding site does not include SHa residues 203 and
205 (data not shown). Instead, these residues seem to be part of the
central domain where PrPC and PrPSc interact
because lack of conversion of MH3 into PrPSc by
MoPrPSc in ScN2a cells could be partially overcome by
changing these two SHa residues into Mo as found in MH2M PrP (data not
shown). Because SHaPrP and MH3 PrP are not converted into
PrPSc, they are not released from protein X, which in turn
prevents MHM2 PrP from binding and being converted.
To explain the results on the transmission of Hu
prions from the brains of CJD patients to Tg mice, we suggested that a
macromolecule provisionally designated protein X participates in the
conversion of PrPC into PrPSc (5). In those
studies, Hu prions did not transmit disease to
Tg(HuPrP)Prnp+/+ mice coexpressing Hu and
MoPrPC but did transmit to Tg(MHu2M)Prnp+/+
mice coexpressing MHu2M PrPC and MoPrPC (26).
Subsequently, transmission of Hu prions to Tg mice expressing HuPrPC was achieved when the mice were crossed into a
Prnp0/0 background. These findings were interpreted in
terms of MoPrPC binding to Mo protein X more avidly than
HuPrPC, thus inhibiting the conversion of
HuPrPC into PrPSc (5). MoPrPC
binding to Mo protein X was similar to that of MHu2M PrPC;
thus, MoPrPC did not inhibit appreciably the conversion of
MHu2M PrPC into PrPSc. An alternative
interpretation of these results was that the C terminus of
MoPrPC bound to HuPrPSc more avidly than
HuPrPC. In this scenario, heterologous PrPC
binds to PrPSc more avidly than does homologous
PrPC; yet homotypic interactions seem to govern conversion
of PrPC into PrPSc whenever this has been
studied (11, 27).
In the studies reported here, the results seemed most readily
interpreted in terms of the binding of PrPC to protein X. If we try to explain the results in terms of PrPC binding
to PrPSc, then we must postulate that the C terminus of
MoPrPC binds more avidly to MoPrPSc than does
that of MHMHuA PrPC. In other words, homologous
PrPC binds to PrPSc more avidly than does
heterologous PrPC; however, this is antithetical to the
alternative interpretation offered above where heterologous
PrPC binds to PrPSc more avidly than does
homologous PrPC. On this basis, we argue that the data
presented here in concert with the earlier results build a convincing
edifice for the existence of protein X.
Determination
of the NMR structure of a recombinant fragment of SHaPrP corresponding
to the residues in PrP 27-30 greatly facilitated our studies of the
protein X binding site on PrPC. Once we determined that
MoPrP residues 214 and 218 were pivotal in the binding of
PrPC to protein X, we examined the orientation of their
side chains on the surface of the C-terminal
The loop consisting of residues 165-171 lies immediately adjacent to
the region of helix C that contains residues that bind to protein X. Although no structure could be assigned to this loop in a study of a
recombinant MoPrP fragment consisting of 111 amino acids (19), the
proximity of the loop to the C-terminal helix and its potential role in
the passage of prions from one species to another were appreciated
(28). To assess the possible role of amino acids in this loop,
substitutions at MoPrP residues 167, 169, 170, and 171 were made. The
replacement of Gln with Arg at 167 or 171 completely abolished
PrPSc formation. These substitutions also inhibited the
conversion of wt MHM2 PrP into PrPSc arguing that the
mutants MHM2 PrP(Q167R) and MHM2 PrP(Q171R) bind to protein X more
avidly than does wt MHM2 PrP.
Studies on the
inhibition of PrPSc formation reported here provide
considerable insight into the mechanism by which PrPC is
converted into PrPSc. Our results argue that
PrPC forms a complex with protein X and that
PrPSc then binds to PrPC resulting in a ternary
complex. Whether PrPC and PrPSc are monomers or
dimers in this scheme is unknown. The ionizing radiation target size of
prions is In our studies we were able to distinguish three classes of
inhibition of PrPSc formation, designated as types 1, 2, and 3 (Table 2, Fig. 3 B-F). Type 1 inhibition is illustrated by the
competition between MoPrPC and HuPrPC(E219) for
binding to Mo protein X. In the absence of MoPrPC,
HuPrPC(E219) is converted into PrPSc (5). The
mutant MHM2 PrP(E218) was not converted into PrPSc in ScN2a
cells and did not prevent conversion of wt MHM2 PrPC into
PrPSc. Type 2 inhibition appears to be noncompetitive and
is depicted by MHM2 PrP(K218) which binds to protein X in ScN2a cells
and prevents conversion of wt MHM2 PrPC into
PrPSc. The binding is sufficiently tight that MHM2
PrP(K218) is also not converted into PrPSc. Type 3 inhibition is also noncompetitive with respect to protein X but occurs
through a different mechanism. This case is demonstrated by
SHaPrPC which binds to Mo protein X but is not released by
interacting with MoPrPSc. In Tg(SHaPrP) mice,
SHaPrPC is converted into PrPSc in the presence
or absence of MoPrPC when the animals are inoculated with
SHa prions (11, 29, 30).
Table 2.
Protein X-mediated mechanisms of inhibition of
PrPSc formation
Proc. Natl. Acad. Sci. USA
Vol. 94,
pp. 10069-10074,
September 1997
Biochemistry
,
,§,
,
,§, and
,
Cellular and Molecular
Pharmacology,
Biochemistry and Biophysics, § Medicine,
and ¶ Pharmaceutical Chemistry, University of California, San
Francisco, CA 94143
ABSTRACT
INTRODUCTION
MATERIALS AND
METHODS
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
ABBREVIATIONS
REFERENCES
-helix and
form a discontinuous epitope with residues 167 and 171 in an adjacent
loop. Substitution of a basic residue at positions 167, 171, or 218 also prevented PrPSc formation: at a mechanistic level,
these mutant PrPs appear to act as "dominant negatives" by
binding protein X and rendering it unavailable for prion propagation.
Our findings seem to explain the protective effects of basic
polymorphic residues in PrP of humans and sheep and suggest therapeutic
and prophylactic approaches to prion diseases.
-helix and form a discontinuous epitope with residues
167 and 171 in an adjacent loop. Substitution of a basic residue at
position 167, 171, or 218 also prevented PrPSc formation:
at a mechanistic level, these mutant PrPs appear to act as "dominant
negatives" by binding to protein X and functionally sequestering it
from the replication process. Our findings may explain the protective
effects of polymorphic basic residues in PrP against Creutzfeldt-Jakob
disease (CJD) and scrapie in humans and sheep, respectively.
Cultured Cells and Antibodies.
-PrP 3F4 is a mAb
raised against SHa PrP27-30 (14). RO73 is an antiserum raised in a
rabbit against SDS/PAGE-purified SHa PrP27-30 (15).
-helix (18-20).
We reasoned that replacement of Mo residues with Hu counterparts at
these positions would inhibit PrPSc formation given the
previous evidence for the species specific preferences for protein X
(5). To distinguish the recombinant PrPSc from
endogenous wild-type (wt) MoPrPSc, we used the
SHa/Mo chimeric PrP designated MHM2 that contains an epitope for the
anti-SHaPrP 3F4 mAb (16). In one assay, we measured the conversion of
mutated MHM2 PrP into PrPSc which allowed us to assess the
influence of amino acid substitutions on PrPSc formation.
In a second assay, we measured the ability of mutated MHM2 PrP to
inhibit the conversion of wt MHM2 PrP into PrPSc. With this
second assay, we were able to measure the relative affinities of two
PrPs for protein X.
Fig. 1.
Characterization of the binding site for
protein X. Western blot analysis of each MHM2 chimeric construct
expressed in ScN2a cells is shown. (A-C)
Lanes: 1, MHM2 PrP; 2, MHMHu(A/B); 3, MHMHuA; 4, MHMHuB; and 5, untransfected control ScN2a cells. (D-F)
Lanes: 6, MHM2 PrP; 7, MHM2(I214); 8, MHM2(E218,R219); 9, MHM2(E218); 10, MHM2(R219); 11, MHM2(I214,E218); and 12, untransfected control ScN2a cells. A and D demonstrate the
expression of each chimeric MHM2 PrP construct: 40 µl of undigested
cell lysates was applied to each lane and MHM2 PrP was detected by
staining with
-PrP 3F4 mAb. B and E
demonstrate the conversion of chimeric MHM2 PrPC into
PrPSc and were stained with
-PrP 3F4 mAb.
C and F show endogenous MoPrPSc as well as chimeric constructs detected with
-PrP RO73 rabbit antiserum. In B-C
and E-F, 500 µl of cell lysate was
digested with proteinase K (20 µg/ml) at 37°C for 1 h
followed by centrifugation at 100,000 × g for
1 h and the loading of the resuspended pellet onto the gel.
[View Larger Version of this Image (61K GIF file)]
Fig. 2.
Mutations at codons 214, 216, and 218 affect PrPSc formation. Western blot analysis of mutated
MHM2 PrP constructs expressed in ScN2a cells. Films were exposed longer
than other figures to detect faint signals.
(A-C) Lane: 1, MHM2 PrP; 2, MHM2(I214,E218); 3, MHM2(E218); 4, MHM2(K218); 5, MHM2(I218); 6, MHM2(A218); 7, MHM2(W218); 8, MHM2(P218); 9, MHM2(R216); 10, MHM2(R216,E218); 11, MHM2(I214); 12, MHM2(K214); 13, MHM2(E214); 14, MHM2(A214); 15, MHM2(W214); 16, MHM2(P214); 17, MHM2(R171); 18, MHM2(N169); and 19, MHM2(R167). (D) Coexpression with MHM2
in the same orientation as in A-C.
Samples were prepared and processed as described in the Fig. 1
legend.
[View Larger Version of this Image (71K GIF file)]
Mo codon number
PrP
residue*
Mutant MHM2
Type of inhibition of PrPSc
formation
Mouse
Human

Syrian
hamster

Sheep

167
Q
E
Q
Q/R
R
2
E
1
169
S
S
N
S
N
None
170
N
N/S
N
N
S
None
171
Q
Q
Q
Q
R
2
209
V
V
V
V
K
1
210
E
E
E
E
K
None
211
Q
Q
Q
Q
K
None
214
V
I
T
I
I
2
K
1
E
2
A
1
W
2
P
1
215
T
T
T
T
Q
None
216
Q
Q
Q
Q
R
3
218
Q
E/K
Q
Q
E
1
K
2
I
1
A
2
W
2
P
1
F
1
R
2
H
2
219
K
R
K
R
R
None
221
S
S
S
S
A
None
222
Q
Q
Q
Q
K
None
*
Multiple residues at a particular position indicate
naturally occurring polymorphisms.
The corresponding codon number is that of Mo increased by
one.
The corresponding codon number is that of Mo increased by
four.
-helix are
expected to destabilize this secondary structure and may result in the increased lability of the protein. No inhibition of wt
MoPrPSc formation by the mutant PrP molecules could be
detected (Fig. 2C).
-helix relative to residues 214 and 218. Further, a mutation of the
corresponding HuPrP Gln at residue 217 causes inherited prion disease;
a Swedish family with Gerstmann-Sträussler-Scheinker disease
has been reported with a Q
R mutation (22). Although brain sections
showed PrP amyloid plaques, extracts showed neither infectivity nor
protease resistant PrPSc on Western blots (23, 24).
R mutation destabilizes the structure of PrPC
leading to inherited prion disease but prevents folding
PrPSc into a protease resistant form. The Mo Gln residue at
218 allows MHM2 PrP(R216) to compete with wt MHM2 PrP for binding to
protein X, whereas the Hu Glu residue decreases the affinity of this
protein for protein X. With the Hu Glu residue, no inhibition of the
conversion of wt MHM2 PrP into PrPSc was observed (Fig.
2D, lane 10).
-helix denoted helix C. MoPrP residues 214 and 218 correspond to SHaPrP residues 215 and 219. The side chains of these two residues protrude onto the surface of
helix C away from the Asn-linked oligosaccharides and the interface that is formed when PrPSc binds to PrPC (Fig.
3A) (20).
Fig. 3.
The role of protein X in PrPSc
formation and the influence of mutations in PrPC on the
prion replication cycle. (A) NMR structure of SHa
rPrP90-231. The color scheme is as follows:
-helices A (residues
144-157), B (172-193), and C (200-227) in pink; disulfide between
Cys-179 and Cys-214 in yellow; hydrophobic cluster composed of residues 113-126 in red; loops in gray; residues 129-134 in green encompassing strand S1 and residues 159-165 in blue encompassing strand S2; the
arrows span residues 129-131 and 161-163, as these show a closer
resemblance to
-sheet (20). Structure of protein X binding site of
SHa rPrP90-231 illustrating the proximity of the 165-171 loop, where
residues Q168 and Q172 are depicted with a low density van der Waals
rendering and helix C residues T215 and Q219 depicted with a high
density van der Waals rendering. SHaPrP residues Q168, Q172, T215, and
Q219 correspond to MoPrP residues Q167, Q171, T214, and Q218,
respectively. The illustration was generated with the program UCSF
MIDASPLUS. (B) Ordering experiments demonstrate that PrPC interacts with protein X prior to the creation of
the PrPC/PrPSc complex. Two cycles are
required for PrPSc formation. The left hand cycle shows
protein X binding to PrPC (green) resulting in a
heterologous complex that is then competent to interact with
PrPSc (red). Upon conversion of PrPC to nascent
PrPSc, protein X dissociates from the complex owing to its
relative lack of affinity for PrPSc. Protein X is
subsequently recycled. The right hand cycle depicts the interaction of
PrPSc with the PrPC/protein X complex and the
conversion of PrPC into nascent PrPSc. With
time, the result is an exponential increase in PrPSc
concentration as the template for conversion is recycled.
(C) Type 1 inhibition (Table 2): mutant PrPC
(blue) containing an amino acid substitution in the
PrPC/protein X interface (e.g., E218 in MoPrP) interacts
weakly with protein X. Dotted lines depict the failure of the mutant
PrPC to interact with protein X and the subsequent
inability to form the protein X/PrPC/PrPSc
complex. Under these circumstances PrPSc formation either
does not occur or proceeds slowly. (D) Type 2 inhibition:
mutant PrPC (purple) containing an amino acid substitution
in the protein X/PrPC interface (e.g., K218 in MoPrP)
forms a very tight complex. PrPSc is able to bind to this
protein X/PrPC complex but conversion of PrPC
to PrPSc is prevented owing to the failure of the protein
X/PrPC/PrPSc complex to release protein X. Dotted lines are shown for the steps in the replication cycle that are
blocked. (E) Dominant-negative effect of tight binding
mutants of PrPC. Mutant PrPC [e.g., K218
(purple)] successfully competes with wt PrPC (green)
for binding to protein X. The protein
X/PrPC(K218)/PrPSc complex is formed but
conversion is inhibited as in D. (F) Type 3 inhibition: PrPC from a distinct
species [e.g., SHa (gold)] is able to bind Mo protein X, but the Mo
protein X/SHaPrPC/MoPrPSc complex is not
competent for conversion. The result is that protein X is sequestered
and scrapie prions are not replicated.
[View Larger Version of this Image (43K GIF file)]
55 kDa suggesting that PrPSc in its infectious
form is a dimer. Molecular modeling studies suggested that the
N-terminal region (residues 90-140) of PrPSc might
participate in the dimer interface. The stoichiometry of the protein
X/PrPC complex is unknown since the number of binding
sites for PrPC on protein X remains to be established. We
presume that the protein X/PrPC complex may play a role
in the function of PrPC which remains unknown; it is
doubtful that the protein X/PrPC complex exists for the
production of PrPSc unless PrPSc at low levels
has a cellular function that has eluded us, to date.
Type of inhibition
Example
Putative
mechanism
Relative affinity for protein X*
1
HuPrPC(E219)
binding to Mo protein X inhibited by
MoPrPC
Competitive
Low
2
HuPrPC(K219) prevents MoPrPC binding
to protein X
Noncompetitive
High
3
SHaPrPC
binds to protein X and is not released by
MoPrPSc
Noncompetitive
Similar
*
Affinity is relative to that of MoPrPC for Mo
protein X.
A HuPrP polymorphism at codon 219, which corresponds to MoPrP codon 218, has been reported in the Japanese population (21); about 12% of the people carry the Lys allele instead of Glu. To date, the Lys allele has not been found in 50 autopsied CJD cases in Japan (T. Kitamoto, personal communication). This finding is highly significant (Fisher's exact test, P = 0.00005), which suggests that HuPrPC(K219) acts as a dominant negative in preventing CJD. In view of the results presented here with MHM2 PrP(K219), it seems likely that the K219 allele prevents CJD through the high avidity of HuPrPC(K219) for protein X. The high affinity binding of HuPrPC(K219) to protein X prevents HuPrPC(K219) from being converted into PrPSc, and it prevents HuPrPC(E219) from interacting with protein X. The latter mode of action of HuPrPC(K219) in patients heterozygous for the polymorphism would explain the dominant negative effect of the K219 substitution (Fig. 3E). When we introduced the K218 mutation into MHM2 PrP expressed in ScN2a cells, the recombinant protein was not converted into PrPSc and it inhibited the conversion of wt MHM2 PrP into PrPSc.
Sheep Polymorphism at Codon 171.In sheep, the substitution of a basic residue at position 171 probably prevents scrapie through a dominant-negative mechanism similar to that postulated for a basic residue at 219 protecting humans from CJD. With few exceptions, only sheep that are Q/Q at 171 develop scrapie; sheep that are Q/R or R/R are resistant (31-39). These findings suggest that R171 creates a PrPC molecule in sheep that acts as a dominant negative in preventing PrPSc formation (Fig. 3E). When we introduced the Q167R or Q171R mutation into MHM2 PrP expressed in ScN2a cells, the recombinant protein was not converted into PrPSc and it inhibited the conversion of wt MHM2 PrP into PrPSc. Q167R and Q171 in MoPrP correspond to Q171 and Q175 in sheep PrP, respectively.
New Approaches to Preventing and Treating Prion Diseases.As our understanding of prion propagation increases, it should be possible to design effective therapeutics. Because people at risk for inherited prion diseases can now be identified decades before neurologic dysfunction is evident, the development of an effective therapy for these fully penetrant disorders is imperative (40, 41). Although we have no way of predicting the number of individuals who may develop neurologic dysfunction from bovine prions in the future (42), seeking an effective therapy now seems most prudent. Interfering with the conversion of PrPC into PrPSc seems to be the most attractive therapeutic target (43). Either stabilizing the structure of PrPC by binding a drug or modifying the action of protein X that might function as a molecular chaperone are reasonable strategies. Whether it is more efficacious to design a drug that binds to PrPC at the protein X binding site or one that mimics the structure of PrPC with basic polymorphic residues that seem to prevent scrapie and CJD remains to be determined (Fig. 3A). Because PrPSc formation seems limited to caveolae-like domains, drugs designed to inhibit this process need not penetrate the cytosol of cells but they do need to enter the central nervous system. Alternatively, drugs that destabilize the structure of PrPSc might also be possible to construct.
The production of domestic animals that do not replicate prions may also prove to be important with respect to preventing prion disease. Sheep encoding the R/R polymorphism at position 171 seem resistant to scrapie (31-39); presumably, this was the genetic basis of Parry's scrapie eradication program in Great Britain 30 years ago (44, 45). A more effective approach using dominant negatives for producing prion resistant domestic animals including sheep and cattle is probably the expression of PrP transgenes encoding K219 or R171, or possibly both basic residues (Fig. 3E). Such an approach can be readily evaluated in Tg mice and once shown to be effective, it can be instituted by artificial insemination of sperm from males homozygous for the transgene.
To whom reprint requests should be addressed at:
Department of Neurology, University of California, San Francisco, CA
94143-0518.
This work was supported by grants from the National Institutes of Health (NS14069, AG08967, AG02132, NS22786, and AG10770) and by gifts from the Leila and Harold G. Mathers Foundation, the Sherman Fairchild Foundation, and Centeon Inc. Use of the Computer Graphics Lab at the University of California, San Francisco, was supported by National Institutes of Health Grant RR01081.
Hu, human; Tg, transgenic; PrP, prion protein; PrPSc, scrapie isoform of PrP; PrPC, cellular isoform of PrP; Mo, mouse; CJD, Creutzfeldt-Jakob disease; SHa, Syrian hamster; Prnp0/0, PrP-deficient; N2a, mouse neuroblastoma; ScN2a, scrapie-infected mouse neuroblastoma; wt, wild type.
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