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The Burnham Institute, La Jolla Cancer Research Center, 10901 North
Torrey Pines Road, La Jolla, CA 92037
Edited by Carlo M. Croce, Thomas Jefferson University,
Philadelphia, PA, and approved July 14, 2000 (received for review May 10, 2000)
A remarkable instability at simple repeated sequences characterizes
gastrointestinal cancer of the microsatellite mutator phenotype (MMP).
Mutations in the DNA mismatch repair gene family underlie the MMP, a
landmark for hereditary nonpolyposis colorectal cancer. These tumors
define a distinctive pathway for carcinogenesis because they display a
particular spectrum of mutated cancer genes containing target repeats
for mismatch repair deficiency. One such gene is BAX, a
proapoptotic member of the Bcl-2 family of proteins, which
plays a key role in programmed cell death. More than half of colon and
gastric cancers of the MMP contain BAX frameshifts in a
(G)8 mononucleotide tract. However, the functional significance of these mutations in tumor progression has not been established. Here we show that inactivation of the wild-type
BAX allele by de novo frameshift
mutations confers a strong advantage during tumor clonal evolution.
Tumor subclones with only mutant alleles frequently appeared after
inoculation into nude mice of single-cell clones of colon tumor cell
lines with normal alleles. In contrast, no clones of BAX-expressing
cells were found after inoculation of homozygous cell clones without
wild-type BAX. These results support the interpretation
that BAX inactivation contributes to tumor progression
by providing a survival advantage. In this context, survival analyses
show that BAX mutations are indicators of poor prognosis
for both colon and gastric cancer of the MMP.
Tumors of the microsatellite
mutator phenotype (MMP) accumulate hundreds of thousands of clonal
somatic mutations in simple repeated sequences (1). The MMP, also known
as replication error or microsatellite instability, is characteristic
of the majority of tumors from kindreds with hereditary nonpolyposis colorectal cancer and a minority of sporadic gastrointestinal cancers
(1-4). Tumors of the MMP are paradigmatic for the cancer as a mutator
phenotype hypothesis (5). This profound genomic instability is a result
of mutations in the DNA mismatch repair gene family (6), germ-line
mutations in hereditary nonpolyposis colorectal cancer, and somatic
mutations in sporadic gastrointestinal cancer (7, 8).
Tumors of the MMP display striking differences in phenotype relative to
tumors without microsatellite instability (1, 2, 7, 9). MMP colon
cancers represent a distinct molecular pathway for carcinogenesis
(10-12) because, as a result of their mutator phenotype, the mutated
cancer genes are, in general, different from those mutated in tumors
without mismatch repair deficiency (1, 8, 9-14). The
proapoptotic gene BAX is one of these specific
cancer genes of tumors of the mutator phenotype pathway. More than half
of gastrointestinal MMP tumors contain BAX mutations, whereas these mutations are rarely found in tumors without enhanced microsatellite instability (15-19). BAX mutations have been
also identified in hematological malignancies (20).
BAX belongs to the Bcl-2 family of proteins and is a key player in
apoptosis (21, 22). The Bcl-2 gene was the first
isolated oncogene that functions by altering the control for programmed cell death rather than by stimulating cell proliferation (23). BAX and
Bcl-2 are antagonists and their balance regulates the apoptotic
response by the cell to some apoptotic stimuli (24). BAX is
localized in the cytoplasm and translocates to mitochondria in response
to apoptotic stimuli, where it promotes cell death by inducing
the formation of ion-permeable pores that disrupt the mitochondrial
membrane barrier (25-27). BAX also contributes to the
apoptotic response by binding to antiapoptotic proteins of the Bcl-2 family via its BH3 domain and inhibiting their functions (28, 29).
The common occurrence of frameshift mutations in the BAX
gene in colon and gastric cancers of the MMP suggests that inactivation of BAX during tumorigenesis may contribute to tumor
progression by enhancing escape from apoptosis. This hypothesis
is supported by the effect of reduced BAX expression in some systems
(30-32). However, the functional significance of these mutations in
malignancy remains to be established.
In this study we have addressed this issue by taking advantage of the
reversibility of the frameshift mutations in tumor cells with mismatch
repair deficiency. In these tumor cells, insertions and deletions of
one repeated unit occur with frequencies at least 2 orders of magnitude
higher than in normal cells (33). This facilitates the isolation of
single-cell clones with insertions and deletions of one nucleotide in
the BAX (G)8 tract, which in turn can
be used to compare their properties in tumorigenicity assays in nude
mice. Frameshift mutations in BAX (and other genes) in
tumors of the MMP present a unique feature. These mutations (insertions/deletions) are reversible, and thus, the
existence of positive selection for, but not against, can be
unambiguously demonstrated for an identical mutational event. By using
this experimental system, we report here that frameshift mutations inactivating BAX are under a strong selective pressure in
colon tumor cells of the MMP, establishing a functional role for the common BAX frameshift mutations in tumor progression. In
support of this notion we also report the association between
BAX mutations and poor prognosis for both colon and gastric
cancers of the MMP.
Tumorigenicity Assays and Immunostaining.
HCT116 and LS180 cell lines were cultured in DMEM containing 10% FCS.
Suspensions of trypsinized cells were diluted to an average of 0.3 cell
per well and transferred into 96-well plates. Single colonies were
isolated after 2 weeks. One million cells were inoculated s.c. in
duplicate into nude mice. One to 2 months after inoculation, tumors
were excised and fixed in Bouin's solution. Fixed tumors were embedded
in paraffin. Immunostaining for BAX was done as described (34). In
brief, dewaxed sections of tumors were exposed to a polyclonal antibody
(1712-PAB, generated against a synthetic peptide) specific for BAX.
Working dilutions for paraffin immunohistochemistry were 1:800 to
1:1,500 in 0.1 M Tris buffer (pH 7.6) containing 10% normal goat
serum, 2% BSA, and 0.1% ovalbumin. The secondary antibody was
biotinylated goat anti-rabbit IgG, supplemented with ovalbumin.
Immunoreactivity was revealed with standard ABC techniques (Vector
Laboratories) by using diaminobenzidine as the chromogen. By using
BAX-stained slides as a template, microdissection was performed with a
surgical scalpel by scraping the BAX-positive and BAX-negative cancer
areas into Eppendorf tubes. To prevent contamination, a separate blade
was used for scraping the stained and unstained areas of each specimen.
Analysis of BAX Frameshift Mutations.
DNA from cultures and paraffin-embedded tissues was isolated as
described (35, 36). A 94-bp region encompassing the BAX (G)8 tract was amplified by PCR with primers
5'-ATCCAGGATCGAGCAGGGCG-3' and 5'-ACTCGCTCAGCTTCTTGGTG-3'. PCR was
carried out with Vent DNA polymerase (New England Biolabs) for one
cycle of 94°C for 4 min followed by 30 cycles of 94, 55, and 72°C,
for 30 s in each cycle in the presence of 0.2 µCi of
[32P]dCTP (1 Ci = 37 GBq). PCR products
were electrophoresed in a denaturing 6% polyacrylamide gel. The gel
was dried on filter paper and subjected to autoradiography.
Tumors and Survival Analysis.
The origins of colorectal and gastric tumor samples have been described
(15-18). In our previous studies, the MMP was detected in 50 of 385 (13%) tumors of the colon and 29 of 205 (14%) tumors of the stomach.
Frameshift BAX mutations were exclusively present in 25 of
50 (50%) colon and 18 of 29 (62%) gastric tumors of the MMP (17, 18).
An additional 123 colorectal and 75 gastric tumor samples were obtained
from Sapporo Medical University. Informed consent was obtained from
each subject. Of these, 14% (17 of 123) and 16% (12 of 75) were
positive for BAX frameshift mutations, respectively.
Frameshift mutations in transforming growth factor Selection for BAX Frameshift Mutations in
Vivo.
Many cells from the colorectal carcinoma cell line HCT116 are
heterozygous for BAX frameshift mutations at a
(G)8 tract within the gene coding region (15). We
took advantage of the persistent high instability in these tumor cells
(33) to isolate single-cell clones that had undergone a second mutation
in the wild-type allele. We isolated three homozygous single-cell
clones, two with
(G)7/(G)7 and one with
(G)9/(G)7 mutant alleles.
Several heterozygous
(G)8/(G)7 single-cell
clones were also isolated. For simplicity we designate clones with two
mutant alleles as BAX(
Genetics
Mutational inactivation of the proapoptotic gene
BAX confers selective advantage during tumor
clonal evolution
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Abstract
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
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Introduction
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
![]()
Materials and Methods
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
type II receptor
(TGF
RII) and Caspase 5 were
determined by PCR in these additional samples as described (16, 17).
Follow-up information was available for a subset of these tumors. The
tumors from patients with follow-up data represent a mixed sample, with most colon cancers coming from patients from the southwestern United
States and Sapporo, Japan, and most gastric cancers coming from
Japanese patients from Sapporo and Tokyo (17). Survival curves were
determined by the Kaplan-Meier method based on the follow-up data. The
patient status was classified as dead whenever the tumor was directly
involved in outcome. Other causes of death were considered as censored
individuals with no further follow-up. Comparison of survival curves
was accomplished by means of a log-rank test.
![]()
Results and Discussion
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
/
) and heterozygous clones as
BAX(+/
). Because these single-cell clones are the
descendants of a single common progenitor cancer cell,
BAX(+/
) and BAX(
/
) clones have almost
identical genetic backgrounds. By comparing BAX(+/
) with
BAX(
/
) single-cell clones, any growth or survival difference between these cells is probably a result of the difference in the BAX allelic status. We have shown by Western blot
analyses that homozygous BAX(
/
) cells do not express
the protein in contrast to heterozygous BAX(+/
) cells
(15). Therefore, mechanisms of gene silencing do not appear to play a
significant role in BAX gene inactivation.
)
cell clones that express BAX protein and those BAX(
/
)
clones that do not, in several in vitro parameters of cell
growth or survival. We detected only a significant difference in the
number of detached dead cells floating in the media when the cultures
reached confluency. HCT116 BAX(+/
) single-cell clones
had significantly higher numbers of detached apoptotic cells
than HCT116 BAX(
/
) single-cell clones (not shown).
This difference in the number of detached cells suggested a link
between BAX function and the ability of cells to undergo apoptosis on detachment from the intestinal epithelial layer
("anoikis") (37).
) single-cell clones were inoculated into nude
mice, and the resulting tumors were analyzed for the expression of BAX
by immunostaining with anti-BAX antibodies. Insertion or deletion of
one nucleotide in the (G)8 tract within the
wild-type allele of a heterozygous clone generates a homozygous mutant
clone that does not express the protein. This strategy (Fig.
1) permitted us to test whether or not
inactivation of the wild-type BAX allele provides a survival advantage.
|
Directionality of BAX Mutations.
The BAX-negative clones could originate from the expansion of
preexisting mutant cells present in a mixed-cell population. This
possibility was ruled out because tumorigenicity assays with single-cell clones isolated from previous heterozygous single-cell clones yielded identical results (Fig.
2). As a control, we used homozygous
BAX(
/
) single-cell clones to determine the
directionality of the mutations. In this case, back mutations would
result in the appearance of the wild-type allele detectable by
immunostaining. However, in contrast to the results with heterozygous
BAX(+/
) clones, no BAX-positive stained areas were
observed in tumors originating after inoculation of the same number of
cells from homozygous
BAX(G)7/(G)7
single-cell clones (not shown).
|
(G)7 mutations were more frequent than
(G)7
(G)8 mutations.
However, this was not the case because the same result was obtained on inoculation of a homozygous clone containing mutant alleles with 7 and
9 nucleotides. The (G)9
(G)8 mutation, which was never observed (Fig.
2C), could be no less likely to occur than the frequently
observed (G)8
(G)7 or
(G)8
(G)9 mutations.
These results do not imply that back mutations in the homozygous
BAX(
/
) clones do not occur, but only that cells with
the reverted wild-type allele are not detectable as clonal overgrowths
within the surrounding BAX-negative cells.
Altogether, loss of the wild-type allele was observed in animals
inoculated with 8 of 10 heterozygous clones, but reversion to the
wild-type allele was not observed in any of 7 homozygous clones (Table
1, P = 0.001, Fisher
exact test). Thus, despite their reversibility, all frameshift
mutations detected within the polyguanine tract of the BAX
gene resulted in ablation of BAX expression.
|
BAX Mutations and Cancer Survival. To examine the relevance of the nude mice assays to human cancer pathogenesis, we determined the relationship between BAX mutations and the survival of patients with colon and gastric cancers of the microsatellite mutator phenotype. These tumors are less invasive, and patients exhibit improved survival relative to those with tumors without enhanced microsatellite instability (1, 2, 17, 39-41). We analyzed 508 tumors of the colon and 280 of the stomach for the MMP. The positive tumors were analyzed for BAX frameshift mutations.
The frequency of the MMP was 13% for colon (67 of 508) and 15% for gastric (41 of 280) cancer. BAX mutations accounted for 51% (34 of 67) and 61% (25 of 41) of tumors of the colon and stomach, respectively. Follow-up survival data were available for 36 patients with colorectal cancer with tumors of the MMP and 38 patients with gastric cancer with tumors of the MMP. Patients with BAX mutations had a significantly shorter survival than those without these mutations, for both colorectal (P < 0.01) and gastric (P < 0.01) cancer (Fig. 3). Simultaneous analysis in these tumors for frameshift mutations in TGF
RII and
Caspase 5, other genes that target the MMP, revealed no
significant differences in survival (Fig. 3 and data not shown).
|
RII occurs relatively early (45, 46). In
contrast, the tumor suppressor function of BAX appears to
occur later in tumor progression, as shown by the lack of clonality of
these mutations in some tumors (15-19, 47). However, the mutations
that occur in BAX at a late stage of tumorigenesis are
independent prognostic indicators of poor survival. They also define a
useful difference in genotype and phenotype among tumors of the MMP.
| |
Acknowledgements |
|---|
This work was supported by the National Institutes of Health National Cancer Institute Grants R01CA63585 and R01CA38579 (to M.P.).
| |
Abbreviations |
|---|
MMP, microsatellite mutator phenotype;
TGF
RII, transforming growth factor
type II receptor.
| |
Footnotes |
|---|
* To whom reprint requests should be addressed. E-mail: mperucho{at}ljcrf.edu.
This paper was submitted directly (Track II) to the PNAS office.
Article published online before print: Proc. Natl. Acad. Sci. USA, 10.1073/pnas.190210897.
Article and publication date are at www.pnas.org/cgi/doi/10.1073/pnas.190210897
| |
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D. Xiao, Y. Zeng, S. Choi, K. L. Lew, J. B. Nelson, and S. V. Singh Caspase-Dependent Apoptosis Induction by Phenethyl Isothiocyanate, a Cruciferous Vegetable-Derived Cancer Chemopreventive Agent, Is Mediated by Bak and Bax Clin. Cancer Res., April 1, 2005; 11(7): 2670 - 2679. [Abstract] [Full Text] [PDF] |
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A. W. Tolcher, J. Kuhn, G. Schwartz, A. Patnaik, L. A. Hammond, I. Thompson, H. Fingert, D. Bushnell, S. Malik, J. Kreisberg, et al. A Phase I Pharmacokinetic and Biological Correlative Study of Oblimersen Sodium (Genasense, G3139), an Antisense Oligonucleotide to the Bcl-2 mRNA, and of Docetaxel in Patients with Hormone-Refractory Prostate Cancer Clin. Cancer Res., August 1, 2004; 10(15): 5048 - 5057. [Abstract] [Full Text] [PDF] |
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X. Wang, H. Deng, I. Basu, and L. Zhu Induction of Androgen Receptor-Dependent Apoptosis in Prostate Cancer Cells by the Retinoblastoma Protein Cancer Res., February 15, 2004; 64(4): 1377 - 1385. [Abstract] [Full Text] [PDF] |
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R. L. Hayward, J. S. Macpherson, J. Cummings, B. P. Monia, J. F. Smyth, and D. I. Jodrell Enhanced oxaliplatin-induced apoptosis following antisense Bcl-xl down-regulation is p53 and Bax dependent: Genetic evidence for specificity of the antisense effect Mol. Cancer Ther., February 1, 2004; 3(2): 169 - 178. [Abstract] [Full Text] [PDF] |
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J. Liu, Q. Dai, J. Chen, D. Durrant, A. Freeman, T. Liu, D. Grossman, and R. M. Lee Phospholipid Scramblase 3 Controls Mitochondrial Structure, Function, and Apoptotic Response Mol. Cancer Res., October 1, 2003; 1(12): 892 - 902. [Abstract] [Full Text] [PDF] |
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D. Fallik, F. Borrini, V. Boige, J. Viguier, S. Jacob, C. Miquel, J.-C. Sabourin, M. Ducreux, and F. Praz Microsatellite Instability Is a Predictive Factor of the Tumor Response to Irinotecan in Patients with Advanced Colorectal Cancer Cancer Res., September 15, 2003; 63(18): 5738 - 5744. [Abstract] [Full Text] [PDF] |
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T. Ishikawa, T. Fujita, Y. Suzuki, S. Okabe, Y. Yuasa, T. Iwai, and Y. Kawakami Tumor-specific Immunological Recognition of Frameshift-mutated Peptides in Colon Cancer with Microsatellite Instability Cancer Res., September 1, 2003; 63(17): 5564 - 5572. [Abstract] [Full Text] [PDF] |
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Y. Mori, F. M. Selaru, F. Sato, J. Yin, L. A. Simms, Y. Xu, A. Olaru, E. Deacu, S. Wang, J. M. Taylor, et al. The Impact of Microsatellite Instability on the Molecular Phenotype of Colorectal Tumors Cancer Res., August 1, 2003; 63(15): 4577 - 4582. [Abstract] [Full Text] [PDF] |
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P.-F. Cartron, P. Juin, L. Oliver, S. Martin, K. Meflah, and F. M. Vallette Nonredundant Role of Bax and Bak in Bid-Mediated Apoptosis Mol. Cell. Biol., July 1, 2003; 23(13): 4701 - 4712. [Abstract] [Full Text] [PDF] |
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R. L. Hayward, J. S. Macpherson, J. Cummings, B. P. Monia, J. F. Smyth, and D. I. Jodrell Antisense Bcl-xl Down-Regulation Switches the Response to Topoisomerase I Inhibition from Senescence to Apoptosis in Colorectal Cancer Cells, Enhancing Global Cytotoxicity Clin. Cancer Res., July 1, 2003; 9(7): 2856 - 2865. [Abstract] [Full Text] [PDF] |
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M. Olivero, T. Ruggiero, N. Coltella, A. Maffe', R. Calogero, E. Medico, and M. F. Di Renzo Amplification of repeat-containing transcribed sequences (ARTS): a transcriptome fingerprinting strategy to detect functionally relevant microsatellite mutations in cancer Nucleic Acids Res., April 1, 2003; 31(7): e33 - e33. [Abstract] [Full Text] [PDF] |
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K. Kandasamy, S. M. Srinivasula, E. S. Alnemri, C. B. Thompson, S. J. Korsmeyer, J. L. Bryant, and R. K. Srivastava Involvement of Proapoptotic Molecules Bax and Bak in Tumor Necrosis Factor-r |