Bacterial metapopulations in nanofabricated landscapes
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Contributed by Robert H. Austin, September 17, 2006
Abstract
We have constructed a linear array of coupled, microscale patches of habitat. When bacteria are inoculated into this habitat landscape, a metapopulation emerges. Local bacterial populations in each patch coexist and weakly couple with neighbor populations in nearby patches. These spatially distributed bacterial populations interact through local extinction and colonization processes. We have further built heterogeneous habitat landscapes to study the adaptive dynamics of the bacterial metapopulations. By patterning habitat differences across the landscape, our device physically implements an adaptive landscape. In landscapes with higher niche diversity, we observe rapid adaptation to large-scale, low-quality (high-stress) areas. Our results illustrate the potential lying at the interface between nanoscale biophysics and landscape evolutionary ecology.
Footnotes
- ‡To whom correspondence should be addressed. E-mail: rha{at}suiling.princeton.edu
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Author contributions: J.E.K. and P.G. contributed equally to this work; J.E.K., P.G., C.M., S.P., and R.H.A. designed research; J.E.K., P.G., C.M., S.P., and R.H.A. performed research; J.E.K. and P.G. contributed new reagents/analytic tools; J.E.K., P.G., C.M., and R.H.A. analyzed data; and J.E.K., P.G., and R.H.A. wrote the paper.
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↵ †Present address: Division of Nano Sciences, Ewha Womans University, Seoul 120-750, Korea.
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The authors declare no conflict of interest.
- Abbreviations:
- 0D,
- zero-dimensional;
- 1D,
- one-dimensional;
- B&W,
- “black and white”;
- MHP,
- microhabitat patch.
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Freely available online through the PNAS open access option.
- © 2006 by The National Academy of Sciences of the USA
