Cimmino et al. 10.1073/pnas.0506654102.
Table 1. Predicted miRNA::BCL2 interactions by different target prediction programs
|
Rank |
miRNA |
TARGETSCAN (P value) |
PICTAR (score) |
MIRANDA (prediction) |
|
1 |
mir-182 |
0.031 |
4.79 |
|
|
2 |
mir-181 |
0.041 |
||
|
3 |
mir-30 |
0.065 |
||
|
4 |
mir-15 |
0.091 |
2.08 |
|
|
5 |
mir-16 |
0.091 |
2.08 |
|
|
6 |
mir-195 |
0.091 |
2.12 |
|
|
7 |
mir-34 |
0.15 |
1.34 |
Yes |
|
8 |
mir-153 |
0.24 |
0.64 |
|
|
9 |
mir-21 |
0.33 |
0.64 |
|
|
10 |
mir-217 |
0.36 |
2.37 |
|
|
11 |
mir-205 |
0.37 |
||
|
12 |
mir-204 |
0.4 |
0.73 |
Yes |
|
13 |
mir-211 |
0.4 |
0.73 |
Yes |
|
14 |
mir-143 |
0.41 |
3.86 |
|
|
15 |
mir-96 |
1.77 |
||
|
16 |
mir-103 |
1.23 |
||
|
17 |
mir-107 |
1.23 |
||
|
18 |
mir-129 |
Yes |
||
|
19 |
mir-9 |
Yes |
||
|
20 |
mir-137 |
Yes |
||
|
21 |
mir-217 |
Yes |
||
|
22 |
mir-186 |
Yes |
TARGETSCAN (Massachusetts Institute of Technology, Cambridge) can be found at http://genes.mit.edu/targetscan. PICTAR (New York University, New York) can be found at http://pictar.bio.nyu.edu. MIRANDA (Memorial Sloan-Kettering Cancer Center, New York) can be found at www.microrna.org.