Venezuelan encephalitis emergence mediated by a phylogenetically predicted viral mutation
Anishchenko et al. 10.1073/pnas.0509961103.
Supporting Table
File in this Data Supplement:
Table 3. Virus strains sequenced and used for experimental work
|
Strain/virus |
Subtype |
Epidemiological type |
Year of isolation |
Host |
Location of isolation |
GenBank accession number |
|
Beck/Wycoff |
IAB |
Epidemic |
1938 |
Horse |
Venezuela |
AF004471 |
|
Ica |
IAB |
Epidemic |
1942 |
Horse |
Peru |
AF093101 |
|
Trinidad donkey (TRD) |
IAB |
Epidemic |
1943 |
Donkey |
Trinidad |
L01442 |
|
Piura |
IAB |
Epidemic |
1946 |
Horse |
Peru |
AF093104 |
|
CoAn5384 |
IAB |
Epidemic |
1967 |
Horse |
Colombia |
AF004466 |
|
E1/68 |
IAB |
Epidemic |
1968 |
Human |
Venezuela |
AF093100 |
|
E123/69 |
IAB |
Epidemic |
1969 |
Human |
Venezuela |
AF093105 |
|
69Z1 |
IAB |
Epidemic |
1969 |
Human |
Guatemala |
AF004470 |
|
71-180 |
IAB |
Epidemic |
1971 |
Horse |
USA |
AF069903 |
|
52/73 |
IAB |
Epidemic |
1973 |
Donkey |
Peru |
AF093103 |
|
E541/73 |
IAB |
Epidemic |
1973 |
Human |
Venezuela |
AF093102 |
|
V198 |
IC |
Epidemic |
1962 |
Human |
Colombia |
U55342 |
|
P676 |
IC |
Epidemic |
1963 |
Mosquito |
Venezuela |
AF375051 |
|
SH3 |
IC |
Epidemic |
1992 |
Human |
Venezuela |
U55360 |
|
SH5 |
IC |
Epidemic |
1992 |
Human |
Venezuela |
AF004853 |
|
243937 |
IC |
Epidemic |
1992 |
Horse |
Venezuela |
AF004459 |
|
6119 |
IC |
Epidemic |
1995 |
Human |
Venezuela |
U55347 |
|
3908 |
IC |
Epidemic |
1995 |
Human |
Venezuela |
U55350 |
|
CoAn9004 |
ID |
Enzootic |
1969 |
Hamster |
Colombia |
AF004467 |
|
MAC87 |
ID |
Enzootic |
1997 |
Hamster |
Venezuela |
AF348336 |
|
MAC10 |
ID |
Enzootic |
1997 |
Hamster |
Venezuela |
AF348335 |
|
IQT1724 |
ID |
Enzootic |
1995 |
Human |
Peru |
AF004464 |
|
IQT8131 |
ID |
Enzootic |
1998 |
Human |
Peru |
DQ390224* |
|
3880 |
ID |
Enzootic |
1961 |
Human |
Panama |
L00930 |
|
59001 |
ID |
Enzootic |
1970 |
Hamster |
Colombia |
AF004468* |
|
IQT7460 |
ID |
Enzootic |
1998 |
Human |
Peru |
AY966910* |
|
DEI5191 |
ID |
Enzootic |
1994 |
Human |
Peru |
AF004852 |
|
V209A |
ID |
Enzootic |
1960 |
Mouse |
Colombia |
AF004465* |
|
306425 |
ID |
Enzootic |
1972 |
Hamster |
Colombia |
AF004441* |
|
83U434 |
ID |
Enzootic |
1983 |
Hamster |
Colombia |
U55362 |
|
66457 |
ID |
Enzootic |
1981 |
Hamster |
Venezuela |
AF004472 |
|
66637 |
ID |
Enzootic |
1981 |
Hamster |
Venezuela |
AF004458 |
|
ZPC738 |
ID |
Enzootic |
1997 |
Hamster |
Venezuela |
AF100566 |
|
MenaII |
IE |
Enzootic |
1962 |
Human |
Panama |
AF075252 |
|
68U201 |
IE |
Enzootic |
1968 |
Hamster |
Guatemala |
U34999 |
|
80U76 |
IE |
Enzootic |
1980 |
Hamster |
Guatemala |
AF448539 |
|
CPA201 |
IE |
Epizootic |
1993 |
Horse |
Mexico |
AF448537 |
|
OAX131 |
IE |
Epizootic |
1996 |
Horse |
Mexico |
AF448536 |
|
OAX142 |
IE |
Epizootic |
1996 |
Horse |
Mexico |
AF448538 |
|
96-37820 |
IE |
Epizootic |
1996 |
Horse |
Mexico |
AF448535 |
|
Mosso das Pedras |
IF |
Enzootic |
1978 |
Mosquito |
Brazil |
AF398382 |
|
Fe37c (Everglades) |
II |
1963 |
Mosquito |
USA |
AF075251 |
|
|
Fe5-47et (Everglades) |
II |
Enzootic |
1965 |
Mosquito |
USA |
AF004469 |
|
BeAn8 (Mucambo) |
IIIA |
Enzootic |
1954 |
Monkey |
Brazil |
AF398383 |
|
Tonate |
IIIB |
Enzootic |
1973 |
Bird |
AF398384 |
|
|
71D1252 (Mucambo) |
IIIC |
Enzootic |
1971 |
Peru |
AF398386 |
|
|
FSL190 (Mucambo) |
IIID |
Enzootic |
2000 |
Human |
Peru |
AY966913* |
|
Pixuna |
IV |
Enzootic |
1961 |
Mosquito |
Brazil |
AF075256 |
|
Cabassou |
V |
Enzootic |
1974 |
Mosquito |
French Guiana |
AF398387 |
|
Rio Negro |
VI |
Enzootic |
1980 |
Mosquito |
Argentina |
AF398388 |
*Newly generated or expanded sequences.
This Article
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PNAS March 28, 2006 vol. 103 no. 13 4994-4999
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