Basal cells as stem cells of the mouse trachea and human airway epithelium

  1. Jason R. Rocka,
  2. Mark W. Onaitisb,
  3. Emma L. Rawlinsa,
  4. Yun Lua,
  5. Cheryl P. Clarka,
  6. Yan Xuea,
  7. Scott H. Randellc and
  8. Brigid L. M. Hogana,1
  1. Departments of aCell Biology and
  2. bSurgery, Duke University Medical Center, Durham, NC 27710; and
  3. cCystic Fibrosis/Pulmonary Research and Treatment Center, University of North Carolina, Chapel Hill, NC 27559
  1. Contributed by Brigid L. M. Hogan, June 18, 2009 (received for review May 16, 2009)

Abstract

The pseudostratified epithelium of the mouse trachea and human airways contains a population of basal cells expressing Trp-63 (p63) and cytokeratins 5 (Krt5) and Krt14. Using a KRT5-CreERT2 transgenic mouse line for lineage tracing, we show that basal cells generate differentiated cells during postnatal growth and in the adult during both steady state and epithelial repair. We have fractionated mouse basal cells by FACS and identified 627 genes preferentially expressed in a basal subpopulation vs. non-BCs. Analysis reveals potential mechanisms regulating basal cells and allows comparison with other epithelial stem cells. To study basal cell behaviors, we describe a simple in vitro clonal sphere-forming assay in which mouse basal cells self-renew and generate luminal cells, including differentiated ciliated cells, in the absence of stroma. The transcriptional profile identified 2 cell-surface markers, ITGA6 and NGFR, which can be used in combination to purify human lung basal cells by FACS. Like those from the mouse trachea, human airway basal cells both self-renew and generate luminal daughters in the sphere-forming assay.

Footnotes

  • 1To whom correspondence should be addressed. E-mail: b.hogan{at}cellbio.duke.edu
  • Author contributions: J.R.R., M.W.O., E.L.R., S.H.R., and B.L.H. designed research; J.R.R., M.W.O., E.L.R., Y.L., C.P.C., and Y.X. performed research; J.R.R., M.W.O., E.L.R., S.H.R., and B.L.H. analyzed data; and J.R.R., M.W.O., E.L.R., S.H.R., and B.L.H. wrote the paper.

  • The authors declare no conflict of interest.

  • Data deposition: The data reported in this paper have been deposited in the Gene Expression Omnibus (GEO) database, www.ncbi.nlm.nih.gov/geo (accession number GSE15724).

  • This article contains supporting information online at www.pnas.org/cgi/content/full/0906850106/DCSupplemental.

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