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February 6, 2007; 104 (6)  [Index By Author]  [Cover Photo]  [Masthead (PDF)]

FROM THE COVER

Maintaining pancreatic progenitors

Therapeutic proteins in transgenic eggs

Analyzing free-energy landscapes

Engineered yeast cooperation

Malaria DNA and innate immunity

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down arrow PHYSICAL SCIENCES
    Applied Mathematics
    Applied Physical Sciences
    Physics
    Statistics

down arrow BIOLOGICAL SCIENCES
    Agricultural Sciences
    Applied Biological Sciences
    Biochemistry
    Biophysics
    Cell Biology
    Developmental Biology
    Ecology
    Evolution
    Genetics

    Immunology
    Medical Sciences
    Microbiology
    Neuroscience
    Pharmacology
    Physiology
    Plant Biology

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up arrow THIS WEEK IN PNAS

In This Issue
PNAS 2007 104: 1735-1736. [Full Text] [PDF]  

up arrow EDITORIAL

William C. Clark
Sustainability Science: A room of its own
PNAS 2007 104: 1737-1738. [Extract] [Full Text] [Figures Only] [PDF]  

up arrow COMMENTARIES

James N. Petitte and Paul E. Mozdziak
The incredible, edible, and therapeutic egg
PNAS 2007 104: 1739-1740; published online before print February 1 2007, 10.1073/pnas.0611652104 [Extract] [Full Text] [Figures Only] [PDF]  
* See companion article on page 1771

Maitreya J. Dunham
Synthetic ecology: A model system for cooperation
PNAS 2007 104: 1741-1742; published online before print January 31 2007, 10.1073/pnas.0611067104 [Extract] [Full Text] [Figures Only] [PDF]  
* See companion article on page 1877

Ralf R. Schumann
Malarial fever: Hemozoin is involved but Toll-free
PNAS 2007 104: 1743-1744; published online before print February 1 2007, 10.1073/pnas.0610874104 [Extract] [Full Text] [Figures Only] [PDF]  
* See companion article on page 1919

up arrow PERSPECTIVES

Amro Hamdoun and David Epel
Embryo stability and vulnerability in an always changing world
PNAS 2007 104: 1745-1750; published online before print January 30 2007, 10.1073/pnas.0610108104 [Abstract] [Full Text] [Figures Only] [PDF]  

up arrow PROFILES

Tinsley H. Davis
Profile of James P. Kennett
PNAS 2007 104: 1751-1753; published online before print January 31 2007, 10.1073/pnas.0609142104 [Extract] [Full Text] [Figures Only] [PDF]  

up arrow PHYSICAL SCIENCES

Applied Mathematics

Wenying Shou, Sri Ram, and Jose M. G. Vilar
From the Cover: Synthetic cooperation in engineered yeast populations
PNAS 2007 104: 1877-1882; published online before print January 31 2007, 10.1073/pnas.0610575104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  
* See Commentary on page 1741

Applied Physical Sciences

Evan R. McCarney, Brandon D. Armstrong, Mark D. Lingwood, and Songi Han
Hyperpolarized water as an authentic magnetic resonance imaging contrast agent
PNAS 2007 104: 1754-1759; published online before print January 30 2007, 10.1073/pnas.0610540104 [Abstract] [Full Text] [Figures Only] [PDF]  

Physics

D. Gfeller, P. De Los Rios, A. Caflisch, and F. Rao
From the Cover: Complex network analysis of free-energy landscapes
PNAS 2007 104: 1817-1822; published online before print January 31 2007, 10.1073/pnas.0608099104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Statistics

S. A. Sisson, Y. Fan, and Mark M. Tanaka
Sequential Monte Carlo without likelihoods
PNAS 2007 104: 1760-1765; published online before print January 30 2007, 10.1073/pnas.0607208104 [Abstract] [Full Text] [Figures Only] [PDF]  

up arrow BIOLOGICAL SCIENCES

Agricultural Sciences

Ajay Pal S. Sandhu, Ricardo V. Abdelnoor, and Sally A. Mackenzie
Transgenic induction of mitochondrial rearrangements for cytoplasmic male sterility in crop plants
PNAS 2007 104: 1766-1770; published online before print January 29 2007, 10.1073/pnas.0609344104 [Abstract] [Full Text] [Figures Only] [PDF] OPEN ACCESS ARTICLE  

Applied Biological Sciences

S. G. Lillico, A. Sherman, M. J. McGrew, C. D. Robertson, J. Smith, C. Haslam, P. Barnard, P. A. Radcliffe, K. A. Mitrophanous, E. A. Elliot, and H. M. Sang
From the Cover: Oviduct-specific expression of two therapeutic proteins in transgenic hens
PNAS 2007 104: 1771-1776; published online before print January 26 2007, 10.1073/pnas.0610401104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Figure] OPEN ACCESS ARTICLE  
* See Commentary on page 1739

Natalie C. Duarte, Scott A. Becker, Neema Jamshidi, Ines Thiele, Monica L. Mo, Thuy D. Vo, Rohith Srivas, and Bernhard Ø. Palsson
Global reconstruction of the human metabolic network based on genomic and bibliomic data
PNAS 2007 104: 1777-1782; published online before print January 31 2007, 10.1073/pnas.0610772104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Biochemistry

Johanna Napetschnig, Günter Blobel, and André Hoelz
Crystal structure of the N-terminal domain of the human protooncogene Nup214/CAN
PNAS 2007 104: 1783-1788; published online before print January 30 2007, 10.1073/pnas.0610828104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Amy Medlock, Larkin Swartz, Tamara A. Dailey, Harry A. Dailey, and William N. Lanzilotta
Substrate interactions with human ferrochelatase
PNAS 2007 104: 1789-1793; published online before print January 29 2007, 10.1073/pnas.0606144104 [Abstract] [Full Text] [Figures Only] [PDF]  

Li Li, Narayana N. Rao, and Arthur Kornberg
Inorganic polyphosphate essential for lytic growth of phages P1 and fd
PNAS 2007 104: 1794-1799; published online before print January 29 2007, 10.1073/pnas.0610763104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Jae-woo Kim, Qi-Qun Tang, Xi Li, and M. Daniel Lane
Effect of phosphorylation and S–S bond-induced dimerization on DNA binding and transcriptional activation by C/EBPbeta
PNAS 2007 104: 1800-1804; published online before print January 30 2007, 10.1073/pnas.0611137104 [Abstract] [Full Text] [Figures Only] [PDF]  

Mark D. Benson, Qiu-Ju Li, Katherine Kieckhafer, David Dudek, Matthew R. Whorton, Roger K. Sunahara, Jorge A. Iñiguez-Lluhí, and Jeffrey R. Martens
SUMO modification regulates inactivation of the voltage-gated potassium channel Kv1.5
PNAS 2007 104: 1805-1810; published online before print January 29 2007, 10.1073/pnas.0606702104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Daniela Barillà, Emma Carmelo, and Finbarr Hayes
The tail of the ParG DNA segregation protein remodels ParF polymers and enhances ATP hydrolysis via an arginine finger-like motif
PNAS 2007 104: 1811-1816; published online before print January 29 2007, 10.1073/pnas.0607216104 [Abstract] [Full Text] [Figures Only] [PDF]  

Biophysics

D. Gfeller, P. De Los Rios, A. Caflisch, and F. Rao
From the Cover: Complex network analysis of free-energy landscapes
PNAS 2007 104: 1817-1822; published online before print January 31 2007, 10.1073/pnas.0608099104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Leonid P. Savtchenko and Dmitri A. Rusakov
The optimal height of the synaptic cleft
PNAS 2007 104: 1823-1828; published online before print January 29 2007, 10.1073/pnas.0606636104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Figure] OPEN ACCESS ARTICLE  

Cell Biology

Maximiliano Gabriel Gutierrez, Hector Alex Saka, Isabel Chinen, Felipe C. M. Zoppino, Tamotsu Yoshimori, Jose Luis Bocco, and María Isabel Colombo
Protective role of autophagy against Vibrio cholerae cytolysin, a pore-forming toxin from V. cholerae
PNAS 2007 104: 1829-1834; published online before print January 31 2007, 10.1073/pnas.0601437104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Figures]  

Helge Amthor, Raymond Macharia, Roberto Navarrete, Markus Schuelke, Susan C. Brown, Anthony Otto, Thomas Voit, Francesco Muntoni, Gerta Vrbóva, Terence Partridge, Peter Zammit, Lutz Bunger, and Ketan Patel
Lack of myostatin results in excessive muscle growth but impaired force generation
PNAS 2007 104: 1835-1840; published online before print January 31 2007, 10.1073/pnas.0604893104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Junli Yan, Jianming Jiang, Ching Aeng Lim, Qiang Wu, Huck-Hui Ng, and Keh-Chuang Chin
BLIMP1 regulates cell growth through repression of p53 transcription
PNAS 2007 104: 1841-1846; published online before print January 30 2007, 10.1073/pnas.0605562104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information] OPEN ACCESS ARTICLE  

Wendy C. Zimmerman and Raymond L. Erikson
Polo-like kinase 3 is required for entry into S phase
PNAS 2007 104: 1847-1852; published online before print January 30 2007, 10.1073/pnas.0610856104 [Abstract] [Full Text] [Figures Only] [PDF]  

Neal Satterly, Pei-Ling Tsai, Jan van Deursen, Daniel R. Nussenzveig, Yaming Wang, Paula A. Faria, Agata Levay, David E. Levy, and Beatriz M. A. Fontoura
Influenza virus targets the mRNA export machinery and the nuclear pore complex
PNAS 2007 104: 1853-1858; published online before print January 31 2007, 10.1073/pnas.0610977104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Figure]  

Shihoko Kojima, Ken Matsumoto, Matsumi Hirose, Miyuki Shimada, Mamoru Nagano, Yasufumi Shigeyoshi, Shin-ichi Hoshino, Kumiko Ui-Tei, Kaoru Saigo, Carla B. Green, Yoshiyuki Sakaki, and Hajime Tei
LARK activates posttranscriptional expression of an essential mammalian clock protein, PERIOD1
PNAS 2007 104: 1859-1864; published online before print January 30 2007, 10.1073/pnas.0607567104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Developmental Biology

Philip A. Seymour, Kristine K. Freude, Man N. Tran, Erin E. Mayes, Jan Jensen, Ralf Kist, Gerd Scherer, and Maike Sander
From the Cover: SOX9 is required for maintenance of the pancreatic progenitor cell pool
PNAS 2007 104: 1865-1870; published online before print January 31 2007, 10.1073/pnas.0609217104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Sau Nguyen Huu, Michèle Oster, Serge Uzan, Fabrice Chareyre, Sélim Aractingi, and Kiarash Khosrotehrani
Maternal neoangiogenesis during pregnancy partly derives from fetal endothelial progenitor cells
PNAS 2007 104: 1871-1876; published online before print January 31 2007, 10.1073/pnas.0606490104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Ecology

Wenying Shou, Sri Ram, and Jose M. G. Vilar
From the Cover: Synthetic cooperation in engineered yeast populations
PNAS 2007 104: 1877-1882; published online before print January 31 2007, 10.1073/pnas.0610575104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  
* See Commentary on page 1741

Eric E. Allen, Gene W. Tyson, Rachel J. Whitaker, John C. Detter, Paul M. Richardson, and Jillian F. Banfield
Genome dynamics in a natural archaeal population
PNAS 2007 104: 1883-1888; published online before print January 31 2007, 10.1073/pnas.0604851104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Evolution

Omprakash Mittapalli, Jonathan J. Neal, and Richard H. Shukle
Antioxidant defense response in a galling insect
PNAS 2007 104: 1889-1894; published online before print January 29 2007, 10.1073/pnas.0604722104 [Abstract] [Full Text] [Figures Only] [PDF] OPEN ACCESS ARTICLE  

Ellen J. Pritham and Cédric Feschotte
Massive amplification of rolling-circle transposons in the lineage of the bat Myotis lucifugus
PNAS 2007 104: 1895-1900; published online before print January 29 2007, 10.1073/pnas.0609601104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Genetics

Brian P. Higgins, Chandra D. Carpenter, and Anna C. Karls
Chromosomal context directs high-frequency precise excision of IS492 in Pseudoalteromonas atlantica
PNAS 2007 104: 1901-1906; published online before print January 30 2007, 10.1073/pnas.0608633104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Jamie M. Bacher and Paul Schimmel
An editing-defective aminoacyl-tRNA synthetase is mutagenic in aging bacteria via the SOS response
PNAS 2007 104: 1907-1912; published online before print January 30 2007, 10.1073/pnas.0610835104 [Abstract] [Full Text] [Figures Only] [PDF]  

Immunology

Sunshin Kim, Isabelle Millet, Hun Sik Kim, Ja Young Kim, Myoung Sook Han, Moon-Kyu Lee, Kwang-Won Kim, Robert S. Sherwin, Michael Karin, and Myung-Shik Lee
NF-{kappa}B prevents beta cell death and autoimmune diabetes in NOD mice
PNAS 2007 104: 1913-1918; published online before print January 31 2007, 10.1073/pnas.0610690104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Figures]  

Medical Sciences

Peggy Parroche, Fanny N. Lauw, Nadege Goutagny, Eicke Latz, Brian G. Monks, Alberto Visintin, Kristen A. Halmen, Marc Lamphier, Martin Olivier, Daniella C. Bartholomeu, Ricardo T. Gazzinelli, and Douglas T. Golenbock
From the Cover: Malaria hemozoin is immunologically inert but radically enhances innate responses by presenting malaria DNA to Toll-like receptor 9
PNAS 2007 104: 1919-1924; published online before print January 29 2007, 10.1073/pnas.0608745104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  
* See Commentary on page 1743

Hirotaka Masuda, Tetsuo Maruyama, Emi Hiratsu, Junichi Yamane, Akio Iwanami, Takashi Nagashima, Masanori Ono, Hiroyuki Miyoshi, Hirotaka James Okano, Mamoru Ito, Norikazu Tamaoki, Tatsuji Nomura, Hideyuki Okano, Yumi Matsuzaki, and Yasunori Yoshimura
Noninvasive and real-time assessment of reconstructed functional human endometrium in NOD/SCID/{gamma}Formula immunodeficient mice
PNAS 2007 104: 1925-1930; published online before print January 29 2007, 10.1073/pnas.0604310104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Emanuela Giacometti, Sandra Luikenhuis, Caroline Beard, and Rudolf Jaenisch
Partial rescue of MeCP2 deficiency by postnatal activation of MeCP2
PNAS 2007 104: 1931-1936; published online before print January 31 2007, 10.1073/pnas.0610593104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Figures]  

Caius G. Radu, Chengyi J. Shu, Stephanie M. Shelly, Michael E. Phelps, and Owen N. Witte
Positron emission tomography with computed tomography imaging of neuroinflammation in experimental autoimmune encephalomyelitis
PNAS 2007 104: 1937-1942; published online before print January 29 2007, 10.1073/pnas.0610544104 [Abstract] [Full Text] [Figures Only] [PDF] OPEN ACCESS ARTICLE  

Stefan Buchholz, Andrew V. Schally, Jörg B. Engel, Florian Hohla, Elmar Heinrich, Frank Koester, Jozsef L. Varga, and Gabor Halmos
Potentiation of mammary cancer inhibition by combination of antagonists of growth hormone-releasing hormone with docetaxel
PNAS 2007 104: 1943-1946; published online before print January 29 2007, 10.1073/pnas.0610860104 [Abstract] [Full Text] [Figures Only] [PDF]  

Microbiology

Robert Van der Geize, Katherine Yam, Thomas Heuser, Maarten H. Wilbrink, Hirofumi Hara, Matthew C. Anderton, Edith Sim, Lubbert Dijkhuizen, Julian E. Davies, William W. Mohn, and Lindsay D. Eltis
A gene cluster encoding cholesterol catabolism in a soil actinomycete provides insight into Mycobacterium tuberculosis survival in macrophages
PNAS 2007 104: 1947-1952; published online before print January 30 2007, 10.1073/pnas.0605728104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Neuroscience

Thomas A. Cleland, Brett A. Johnson, Michael Leon, and Christiane Linster
Relational representation in the olfactory system
PNAS 2007 104: 1953-1958; published online before print January 29 2007, 10.1073/pnas.0608564104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Veronica Setola, Mineko Terao, Denise Locatelli, Stefania Bassanini, Enrico Garattini, and Giorgio Battaglia
Axonal-SMN (a-SMN), a protein isoform of the survival motor neuron gene, is specifically involved in axonogenesis
PNAS 2007 104: 1959-1964; published online before print January 29 2007, 10.1073/pnas.0610660104 [Abstract] [Full Text] [Figures Only] [PDF]  

Laura Manuelidis, Zhoa-Xue Yu, Nuria Barquero, and Brian Mullins
Cells infected with scrapie and Creutzfeldt–Jakob disease agents produce intracellular 25-nm virus-like particles
PNAS 2007 104: 1965-1970; published online before print January 31 2007, 10.1073/pnas.0610999104 [Abstract] [Full Text] [Figures Only] [PDF]  

Angela Hornsten, Jason Lieberthal, Shruti Fadia, Richard Malins, Lawrence Ha, Xiaomeng Xu, Isabelle Daigle, Mindy Markowitz, Gregory O'Connor, Ronald Plasterk, and Chris Li
APL-1, a Caenorhabditis elegans protein related to the human beta-amyloid precursor protein, is essential for viability
PNAS 2007 104: 1971-1976; published online before print January 31 2007, 10.1073/pnas.0603997104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Michelle Smeyne, Justin Boyd, Kennie Raviie Shepherd, Yun Jiao, Brooks Barnes Pond, Matthew Hatler, Roland Wolf, Colin Henderson, and Richard Jay Smeyne
GST{pi} expression mediates dopaminergic neuron sensitivity in experimental parkinsonism
PNAS 2007 104: 1977-1982; published online before print January 31 2007, 10.1073/pnas.0610978104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Figures] OPEN ACCESS ARTICLE  

Andrew D. Steele, Walker S. Jackson, Oliver D. King, and Susan Lindquist
The power of automated high-resolution behavior analysis revealed by its application to mouse models of Huntington's and prion diseases
PNAS 2007 104: 1983-1988; published online before print January 29 2007, 10.1073/pnas.0610779104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Karl D. Murray, Prabhakara V. Choudary, and Edward G. Jones
Nucleus- and cell-specific gene expression in monkey thalamus
PNAS 2007 104: 1989-1994; published online before print January 29 2007, 10.1073/pnas.0610742104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information] OPEN ACCESS ARTICLE  

Marcello D'Ascenzo, Tommaso Fellin, Miho Terunuma, Raquel Revilla-Sanchez, David F. Meaney, Yves P. Auberson, Stephen J. Moss, and Philip G. Haydon
mGluR5 stimulates gliotransmission in the nucleus accumbens
PNAS 2007 104: 1995-2000; published online before print January 26 2007, 10.1073/pnas.0609408104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Pharmacology

Christopher A. Johnston and David P. Siderovski
Structural basis for nucleotide exchange on G{alpha}i subunits and receptor coupling specificity
PNAS 2007 104: 2001-2006; published online before print January 30 2007, 10.1073/pnas.0608599104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Physiology

Flavie Sicard, Monika Ehrhart-Bornstein, Denis Corbeil, Simone Sperber, Alexander W. Krug, Christian G. Ziegler, Valeria Rettori, Samuel M. McCann, and Stefan R. Bornstein
Age-dependent regulation of chromaffin cell proliferation by growth factors, dehydroepiandrosterone (DHEA), and DHEA sulfate
PNAS 2007 104: 2007-2012; published online before print January 30 2007, 10.1073/pnas.0610898104 [Abstract] [Full Text] [Figures Only] [PDF]  

Hon-Wai Koon, Dezheng Zhao, Yanai Zhan, Mary P. Moyer, and Charalabos Pothoulakis
Substance P mediates antiapoptotic responses in human colonocytes by Akt activation
PNAS 2007 104: 2013-2018; published online before print January 30 2007, 10.1073/pnas.0610664104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

Plant Biology

Stephan Pollmann, Armin Springer, Frank Buhr, Abder Lahroussi, Iga Samol, Jean-Marc Bonneville, Gabrielle Tichtinsky, Diter von Wettstein, Christiane Reinbothe, and Steffen Reinbothe
A plant porphyria related to defects in plastid import of protochlorophyllide oxidoreductase A
PNAS 2007 104: 2019-2023; published online before print January 29 2007, 10.1073/pnas.0610934104 [Abstract] [Full Text] [Figures Only] [PDF] [Supporting Information]  

up arrow CORRECTIONS

Correction for Zeri et al., Structure of the coat protein in fd filamentous bacteriophage particles determined by solid-state NMR spectroscopy [Full Text] [Figures Only] [PDF]  

Correction for Wang et al., Bcl10 plays a critical role in NF-{kappa}B activation induced by G protein-coupled receptors [Full Text] [PDF]  

Correction for Wedmann et al., The first fossil leaf insect: 47 million years of specialized cryptic morphology and behavior [Full Text] [PDF]  

Correction for Casola et al., Tracking germinal center B cells expressing germ-line immunoglobulin {gamma}1 transcripts by conditional gene targeting [Full Text] [PDF]  

Correction for Galkin et al., Identification of NVP-TAE684, a potent, selective, and efficacious inhibitor of NPM-ALK [Full Text] [PDF]  

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