New Research In
Physical Sciences
Social Sciences
Featured Portals
Articles by Topic
Biological Sciences
Featured Portals
Articles by Topic
- Agricultural Sciences
- Anthropology
- Applied Biological Sciences
- Biochemistry
- Biophysics and Computational Biology
- Cell Biology
- Developmental Biology
- Ecology
- Environmental Sciences
- Evolution
- Genetics
- Immunology and Inflammation
- Medical Sciences
- Microbiology
- Neuroscience
- Pharmacology
- Physiology
- Plant Biology
- Population Biology
- Psychological and Cognitive Sciences
- Sustainability Science
- Systems Biology
Hessian eigenmaps: Locally linear embedding techniques for high-dimensional data
-
Contributed by David L. Donoho

Abstract
We describe a method for recovering the underlying parametrization of scattered data (mi) lying on a manifold M embedded in high-dimensional Euclidean space. The method, Hessian-based locally linear embedding, derives from a conceptual framework of local isometry in which the manifold M, viewed as a Riemannian submanifold of the ambient Euclidean space ℝn, is locally isometric to an open, connected subset Θ of Euclidean space ℝd. Because Θ does not have to be convex, this framework is able to handle a significantly wider class of situations than the original ISOMAP algorithm. The theoretical framework revolves around a quadratic form ℋ(f) = ∫M ∥Hf(m)∥dm defined on functions f : M ↦ ℝ. Here Hf denotes the Hessian of f, and ℋ(f) averages the Frobenius norm of the Hessian over M. To define the Hessian, we use orthogonal coordinates on the tangent planes of M. The key observation is that, if M truly is locally isometric to an open, connected subset of ℝd, then ℋ(f) has a (d + 1)-dimensional null space consisting of the constant functions and a d-dimensional space of functions spanned by the original isometric coordinates. Hence, the isometric coordinates can be recovered up to a linear isometry. Our method may be viewed as a modification of locally linear embedding and our theoretical framework as a modification of the Laplacian eigenmaps framework, where we substitute a quadratic form based on the Hessian in place of one based on the Laplacian.
Footnotes
-
↵* To whom correspondence should be addressed at: Department of Statistics, Room 128, Sequoia Hall, Stanford University, Stanford, CA 94305. E-mail: donoho{at}stat.stanford.edu.
Abbreviations
- LLE,
- locally linear embedding;
- HLLE,
- Hessian LLE
- Accepted March 19, 2003.
- Copyright © 2003, The National Academy of Sciences
Citation Manager Formats
Sign up for Article Alerts
Jump to section
You May Also be Interested in
More Articles of This Classification
Physical Sciences
Related Content
- No related articles found.
Cited by...
- Reconstruction of normal forms by learning informed observation geometries from data
- Toward a direct and scalable identification of reduced models for categorical processes
- Improving clustering by imposing network information
- Making sense of big data
- Spectral multidimensional scaling
- Empirical intrinsic geometry for nonlinear modeling and time series filtering
- Using sketch-map coordinates to analyze and bias molecular dynamics simulations
- Simplifying the representation of complex free-energy landscapes using sketch-map
- Spectral methods in machine learning and new strategies for very large datasets
- A remark on global positioning from local distances
- Manifold parametrizations by eigenfunctions of the Laplacian and heat kernels
- Generalized multidimensional scaling: A framework for isometry-invariant partial surface matching
- Geometric diffusions as a tool for harmonic analysis and structure definition of data: Diffusion maps