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Research Article

Guanylyl cyclase is an ATP sensor coupling nitric oxide signaling to cell metabolism

I. Ruiz-Stewart, S. R. Tiyyagura, J. E. Lin, S. Kazerounian, G. M. Pitari, S. Schulz, E. Martin, F. Murad, and S. A. Waldman
  1. *Division of Clinical Pharmacology, Departments of Medicine and Biochemistry and Molecular Pharmacology, Thomas Jefferson University, Philadelphia, PA 19107; and †Department of Integrative Biology and Pharmacology, Institute of Molecular Medicine, University of Texas Health Science Center, Houston, TX 77030

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PNAS January 6, 2004 101 (1) 37-42; https://doi.org/10.1073/pnas.0305080101
I. Ruiz-Stewart
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S. R. Tiyyagura
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J. E. Lin
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S. Kazerounian
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G. M. Pitari
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S. Schulz
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E. Martin
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F. Murad
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S. A. Waldman
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  1. Edited by Louis J. Ignarro, University of California School of Medicine, Los Angeles, CA, and approved November 13, 2003 (received for review August 8, 2003)

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    Fig. 1.

    ATP induces allosteric inhibition of sGC. (A) Preparations of purified human sGC are composed of α1 and β1 subunits. Purified sGC (1 μg) was analyzed by SDS/PAGE and stained with GelCode blue. (B and C) ATP inhibits SNP-stimulated crude (B) and purified (C) human sGC. Enzyme activity stimulated by 100 μM SNP was quantified in the presence of varying [ATP], as outlined in Materials and Methods. Reaction rates are expressed as fractional response (enzyme activity in the presence of nucleotide/enzyme activity in the absence of nucleotide). SNP-stimulated activities of crude and purified sGC were 158.3 ± 37.6 pmol cGMP min–1·mg of protein–1 and 3,205 ± 1,296 nmol cGMP min–1·mg of protein–1, respectively. (D) ATP decreases the efficacy, but not the potency, of SNP to activate purified human sGC. ▪, SNP; ▴, SNP plus 1 mM ATP. (E) ATP inhibits purified human sGC by a mixed noncompetitive mechanism. ▪, 100 μM SNP; ▴, 100 μM SNP plus 1 mM ATP. Reaction rates presented in curvilinear plots (B1–E1) were subjected to double reciprocal analysis (B2–E2).

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    Fig. 2.

    Allosteric inhibition by adenine nucleotides is mediated by direct interaction with sGC. (A and B) ATP and 8N3ATP inhibit purified human sGC stimulated by 100 μM SNP with comparable potencies. Reaction rates are expressed as fractional response, described in Fig. 1. ▪, ATP; ▴, 8N3ATP. Reaction rates presented in sigmoidal plots (A) were subjected to double reciprocal analysis (B). (C)8N3ATP specifically interacts with a site on purified human sGC comprised of residues contributed by α1- and β1-subunits. Purified enzyme (1 μg) was incubated in the absence (pos, positive control) or presence of 0.1, 1, or 10 mM ATP for 10 min, followed by addition of 50 μM 8-azido [γ32P]ATP. Reactions were incubated for 10 min and, unless otherwise indicated (neg, negative control), irradiated at 254 nm by 4.4 milliwatts/cm2 for 2 min. Photoaffinity labeling was detected by autoradiography (Upper) and protein with GelCode blue (Lower).

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    Fig. 3.

    Inhibition of sGC by ATP is mediated by an allosteric purine nucleotide binding site. (A) Binding of 8N3ATP to human purified sGC is antagonized by purine nucleotides with a rank order potency of ATP > GTP. Enzyme (1 μg) was preincubated with 1 mM ATP or GTP and photoaffinity-labeled with 50 μM 8-azido [γ32P]ATP, as outlined in Fig. 2. Relative incorporation of radioactivity into sGC in the presence of unlabeled nucleotides is expressed as the percentage of displacement compared to incubations that omitted those nucleotides. (B–E) GTP antagonizes inhibition of sGC by ATP by productively interacting with the allosteric nucleotide binding site. (B) GTP shifted the concentration dependence of ATP inhibition to the right, reflecting the ability of GTP to compete with ATP for binding to the nucleotide regulatory site. Enzyme activity stimulated by 100 μM SNP was quantified by using 50 μM(▪) or 1 mM(▴) GTP. Reaction rates are expressed as fractional response, described in Fig. 1. Reaction rates of purified sGC stimulated by SNP with 50 μM GTP or 1 mM GTP were 619 ± 76 and 3,205.2 ± 1,296 nmol cGMP min–1·mg–1 of protein, respectively. Reaction rates presented in sigmoidal plots (B) were subjected to double reciprocal analysis (C). The Ki of ATP, estimated by nonlinear regression analyses of sigmoidal plots (n = 3), was significantly (P < 0.05) greater when higher concentrations of GTP were used (Inset). (D) Purified human sGC activity stimulated by 100 μM SNP was quantified by using a range of [GTP] in the presence (▴) or absence (▪) of 1 mM ATP. Indeed, [GTP] >1 mM directly inhibit, and attenuate the ability of ATP to inhibit, sGC. The concentration dependence of GTP to attenuate inhibition of sGC by ATP, reflecting productive interaction of GTP with the allosteric nucleotide regulatory site, is illustrated by plotting relative enzyme activities (activity in the absence of ATP/activity in the presence of ATP; V/VATP) (E). In A and E, results represent the means ± SEM of three experiments. *, P < 0.05 compared to 0.1 mM GTP.

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    Fig. 4.

    Mitochondrial ATP regulates SNP-induced intracellular accumulation of cGMP. (A) ATP inhibits SNP-induced cGMP accumulation in RFL-6 cells only when [nucleotide]i are clamped by permeabilizing cells with digitonin. cGMP accumulation in RFL-6 cells induced by 125 μM SNP was quantified in the presence or absence of 5 mM ATP and 20 μM digitonin. (B–E) Oligomycin, an inhibitor of mitochondrial oxidative phosphorylation, reduces [ATP]i (B), which is associated with an increase in SNP-induced accumulation of cGMP (C) in RFL-6 cells. In contrast, oligomycin did not affect the ability of SNP to activate purified human sGC (D). Removal of oligomycin (wash) produced a coordinated time-dependent recovery of [ATP]i (▪) and SNP-induced accumulation of cGMP (▴)(E). [ATP]i and [cGMP]i were quantified after incubation for 1 (E) or 15 (B–D) min with 125 μM SNP, with or without preincubation for 60 (E) or 90 (B–D) min with 25 μM oligomycin. Results represent the means ± SEM of three independent experiments. *, P < 0.05; **, P < 0.01.

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    Table 1. Potency (Ki) of adenine nucleotides to inhibit crude and purified human sGC
    sGC Nucleotide Ki, μM
    Vascular smooth muscle ATP 1,035 ± 121
    8N3ATP ND
    Purified human ATP 2,249 ± 475
    8N3ATP 2,326 ± 1,064
    • Ki values were extracted from nonlinear regression analyses of the sigmoidal plots of the concentration-dependence analyses of ATP inhibition of sGC activated by 100 μM SNP (see Fig. 1) or 8N3ATP (see Fig. 2). Values are means ± SEM of three experiments performed in triplicate. ND, not determined.

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    Table 2. Kinetic parameters of purified sGC inhibited by ATP
    KM, μM Vmax, nmoles cGMP produced/min per mg of protein
    Control 156 + 5 750 + 111
    1 mM ATP 356 + 86* 468 + 48*
    • KM and Vmax values were extracted from nonlinear regression analyses of Michaelis—Menten analyses of sGC stimulated by 100 μM SNP in the presence of different concentrations of Mg-GTP and in the absence or presence of 1 mM ATP (see Fig. 1). Values are means ± SEM of three experiments performed in triplicate.

    • * P < 0.05 with respect to control (no added ATP) using a paired Student t test (two-tailed).

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Guanylyl cyclase is an ATP sensor coupling nitric oxide signaling to cell metabolism
I. Ruiz-Stewart, S. R. Tiyyagura, J. E. Lin, S. Kazerounian, G. M. Pitari, S. Schulz, E. Martin, F. Murad, S. A. Waldman
Proceedings of the National Academy of Sciences Jan 2004, 101 (1) 37-42; DOI: 10.1073/pnas.0305080101

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Guanylyl cyclase is an ATP sensor coupling nitric oxide signaling to cell metabolism
I. Ruiz-Stewart, S. R. Tiyyagura, J. E. Lin, S. Kazerounian, G. M. Pitari, S. Schulz, E. Martin, F. Murad, S. A. Waldman
Proceedings of the National Academy of Sciences Jan 2004, 101 (1) 37-42; DOI: 10.1073/pnas.0305080101
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