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Research Article

Dandruff-associated Malassezia genomes reveal convergent and divergent virulence traits shared with plant and human fungal pathogens

Jun Xu, Charles W. Saunders, Ping Hu, Raymond A. Grant, Teun Boekhout, Eiko E. Kuramae, James W. Kronstad, Yvonne M. DeAngelis, Nancy L. Reeder, Kevin R. Johnstone, Meredith Leland, Angela M. Fieno, William M. Begley, Yiping Sun, Martin P. Lacey, Tanuja Chaudhary, Thomas Keough, Lien Chu, Russell Sears, Bo Yuan, and Thomas L. Dawson Jr
PNAS November 20, 2007 104 (47) 18730-18735; https://doi.org/10.1073/pnas.0706756104
Jun Xu
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Charles W. Saunders
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Ping Hu
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Raymond A. Grant
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Teun Boekhout
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Eiko E. Kuramae
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James W. Kronstad
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Yvonne M. DeAngelis
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Nancy L. Reeder
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Kevin R. Johnstone
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Meredith Leland
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Angela M. Fieno
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William M. Begley
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Yiping Sun
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Martin P. Lacey
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Tanuja Chaudhary
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Thomas Keough
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Lien Chu
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Russell Sears
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Bo Yuan
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Thomas L. Dawson Jr
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  • For correspondence: dawson.tl@pg.com
  1. Edited by Joan Wennstrom Bennett, Rutgers, The State University of New Jersey, New Brunswick, NJ, and approved October 1, 2007 (received for review July 18, 2007)

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Abstract

Fungi in the genus Malassezia are ubiquitous skin residents of humans and other warm-blooded animals. Malassezia are involved in disorders including dandruff and seborrheic dermatitis, which together affect >50% of humans. Despite the importance of Malassezia in common skin diseases, remarkably little is known at the molecular level. We describe the genome, secretory proteome, and expression of selected genes of Malassezia globosa. Further, we report a comparative survey of the genome and secretory proteome of Malassezia restricta, a close relative implicated in similar skin disorders. Adaptation to the skin environment and associated pathogenicity may be due to unique metabolic limitations and capabilities. For example, the lipid dependence of M. globosa can be explained by the apparent absence of a fatty acid synthase gene. The inability to synthesize fatty acids may be complemented by the presence of multiple secreted lipases to aid in harvesting host lipids. In addition, an abundance of genes encoding secreted hydrolases (e.g., lipases, phospholipases, aspartyl proteases, and acid sphingomyelinases) was found in the M. globosa genome. In contrast, the phylogenetically closely related plant pathogen Ustilago maydis encodes a different arsenal of extracellular hydrolases with more copies of glycosyl hydrolase genes. M. globosa shares a similar arsenal of extracellular hydrolases with the phylogenetically distant human pathogen, Candida albicans, which occupies a similar niche, indicating the importance of host-specific adaptation. The M. globosa genome sequence also revealed the presence of mating-type genes, providing an indication that Malassezia may be capable of sex.

  • fungal genomics
  • fungal proteomics
  • seborrheic dermatitis
  • skin
  • fungal mating

Footnotes

  • §§To whom correspondence should be addressed. E-mail: dawson.tl{at}pg.com
  • Author contributions: J.X. and C.W.S. contributed equally to this work; C.W.S. and T.L.D. designed research; J.X., C.W.S., R.A.G., T.B., Y.M.D., N.L.R., K.R.J., M.L., A.M.F., W.M.B., Y.S., M.P.L., T.C., T.K., L.C., and T.L.D. performed research; J.X., C.W.S., P.H., E.E.K., R.S., and B.Y. analyzed data; and J.X., C.W.S., P.H., R.A.G., T.B., J.W.K., and T.L.D. wrote the paper.

  • ↵ ††Present address: Department of Electrical Engineering and Computer Science, University of California, Berkeley, CA 94720.

  • ↵ ‡‡Present address: Department of Computer Science, Institute of Biocomputing and Systems Biology, Shanghai Jiaotong University, Shanghai 200290, China.

  • The authors declare no conflict of interest.

  • This article is a PNAS Direct Submission.

  • Data deposition: The sequences reported in this paper have been deposited in the DNA Data Bank of Japan/European Molecular Biology Laboratory/GenBank database [accession nos. AAYY00000000 (M. globosa) and AAXK00000000 (M. restricta)]. The versions described in this paper are the first versions, AAYY01000000 and AAXK01000000.

  • This article contains supporting information online at www.pnas.org/cgi/content/full/0706756104/DC1.

  • Freely available online through the PNAS open access option.

  • © 2007 by The National Academy of Sciences of the USA
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Dandruff-associated Malassezia genomes reveal convergent and divergent virulence traits shared with plant and human fungal pathogens
Jun Xu, Charles W. Saunders, Ping Hu, Raymond A. Grant, Teun Boekhout, Eiko E. Kuramae, James W. Kronstad, Yvonne M. DeAngelis, Nancy L. Reeder, Kevin R. Johnstone, Meredith Leland, Angela M. Fieno, William M. Begley, Yiping Sun, Martin P. Lacey, Tanuja Chaudhary, Thomas Keough, Lien Chu, Russell Sears, Bo Yuan, Thomas L. Dawson
Proceedings of the National Academy of Sciences Nov 2007, 104 (47) 18730-18735; DOI: 10.1073/pnas.0706756104

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Dandruff-associated Malassezia genomes reveal convergent and divergent virulence traits shared with plant and human fungal pathogens
Jun Xu, Charles W. Saunders, Ping Hu, Raymond A. Grant, Teun Boekhout, Eiko E. Kuramae, James W. Kronstad, Yvonne M. DeAngelis, Nancy L. Reeder, Kevin R. Johnstone, Meredith Leland, Angela M. Fieno, William M. Begley, Yiping Sun, Martin P. Lacey, Tanuja Chaudhary, Thomas Keough, Lien Chu, Russell Sears, Bo Yuan, Thomas L. Dawson
Proceedings of the National Academy of Sciences Nov 2007, 104 (47) 18730-18735; DOI: 10.1073/pnas.0706756104
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