Identifying personal microbiomes using metagenomic codes | PNAS

Edited by Ralph R. Isberg, Howard Hughes Medical Institute, Tufts University School of Medicine, Boston, MA, and approved April 6, 2015 (received for review December 15, 2014)

Online Impact

Article Information

vol. 112 no. 22 E2930-E2938

DOI:

https://doi.org/10.1073/pnas.1423854112

PubMed:

Published By:

National Academy of Sciences

Print ISSN:

Online ISSN:

History:

Published in issue June 2, 2015.
Published first May 11, 2015.

Author Information

Eric A. Franzosa^a,^b,
Katherine Huang^b,
James F. Meadow^c,
Dirk Gevers^b,
Katherine P. Lemon^d,^e,
Brendan J. M. Bohannan^c, and
Curtis Huttenhower^a,^b,¹

^aBiostatistics Department, Harvard School of Public Health, Boston, MA 02115;
^bMicrobial Systems and Communities, Genome Sequencing and Analysis Program, The Broad Institute, Cambridge, MA 02142;
^cInstitute of Ecology and Evolution, University of Oregon, Eugene, OR 97403;
^dDepartment of Microbiology, The Forsyth Institute, Cambridge, MA 02142; and
^eDivision of Infectious Diseases, Boston Children’s Hospital, Harvard Medical School, Boston, MA 02115

Edited by Ralph R. Isberg, Howard Hughes Medical Institute, Tufts University School of Medicine, Boston, MA, and approved April 6, 2015 (received for review December 15, 2014)

Footnotes

↵¹To whom correspondence should be addressed. Email: chuttenh{at}hsph.harvard.edu.

Author contributions: E.A.F., D.G., K.P.L., B.J.M.B., and C.H. designed research; E.A.F. and K.H. performed research; E.A.F. and K.H. contributed new reagents/analytic tools; E.A.F., J.F.M., D.G., K.P.L., B.J.M.B., and C.H. analyzed data; and E.A.F., K.H., J.F.M., D.G., K.P.L., B.J.M.B., and C.H. wrote the paper.
The authors declare no conflict of interest.
This article is a PNAS Direct Submission.
See Commentary on page 6778.
This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1423854112/-/DCSupplemental.

Cited By...

Article usage

Article usage: May 2015 to March 2021

	Abstract	Full	Pdf
May 2015	10645	19	1418
Jun 2015	6921	319	825
Jul 2015	1460	113	251
Aug 2015	799	99	180
Sep 2015	945	108	172
Oct 2015	826	135	154
Nov 2015	765	122	108
Dec 2015	803	83	158
Total 2015	23164	998	3266
Jan 2016	642	214	126
Feb 2016	532	100	121
Mar 2016	879	137	144
Apr 2016	432	99	119
May 2016	482	94	121
Jun 2016	465	84	91
Jul 2016	337	47	75
Aug 2016	400	60	101
Sep 2016	515	66	167
Oct 2016	567	82	157
Nov 2016	605	106	146
Dec 2016	434	42	57
Total 2016	6290	1131	1425
Jan 2017	438	57	82
Feb 2017	454	83	69
Mar 2017	453	65	96
Apr 2017	397	49	126
May 2017	389	83	116
Jun 2017	281	32	48
Jul 2017	341	31	44
Aug 2017	279	51	45
Sep 2017	439	65	72
Oct 2017	316	55	94
Nov 2017	359	66	76
Dec 2017	264	68	59
Total 2017	4410	705	927
Jan 2018	299	108	66
Feb 2018	278	158	44
Mar 2018	509	377	77
Apr 2018	598	491	81
May 2018	349	172	78
Jun 2018	316	192	89
Jul 2018	256	131	52
Aug 2018	318	139	60
Sep 2018	317	148	50
Oct 2018	146	204	65
Nov 2018	128	194	66
Dec 2018	104	174	62
Total 2018	3618	2488	790
Jan 2019	131	204	57
Feb 2019	137	139	48
Mar 2019	168	138	55
Apr 2019	159	119	75
May 2019	135	139	55
Jun 2019	73	95	56
Jul 2019	49	90	36
Aug 2019	58	107	48
Sep 2019	148	172	58
Oct 2019	222	163	86
Nov 2019	152	126	53
Dec 2019	105	127	43
Total 2019	1537	1619	670
Jan 2020	97	151	42
Feb 2020	64	121	43
Mar 2020	97	166	50
Apr 2020	94	153	76
May 2020	76	139	66
Jun 2020	69	92	50
Jul 2020	69	137	48
Aug 2020	63	92	58
Sep 2020	88	138	78
Oct 2020	78	181	62
Nov 2020	88	215	78
Dec 2020	71	194	48
Total 2020	954	1779	699
Jan 2021	79	281	94
Feb 2021	71	162	55
Mar 2021	14	20	7
Total 2021	164	463	156
Total	40137	9183	7933

Request Permissions

Article Classifications

Biological Sciences
Microbiology

See related content:

Microbiome codes
- May 26, 2015

Proceedings of the National Academy of Sciences: 112 (22)

Table of Contents

You May Also be Interested in

Setting sun over a sun-baked dirt landscape

Core Concept: Popular integrated assessment climate policy models have key caveats

Better explicating the strengths and shortcomings of these models will help refine projections and improve transparency in the years ahead.

Image credit: Witsawat.S.

Model of the Amazon forest

News Feature: A sea in the Amazon

Did the Caribbean sweep into the western Amazon millions of years ago, shaping the region’s rich biodiversity?

Image credit: Tacio Cordeiro Bicudo (University of São Paulo, São Paulo, Brazil), Victor Sacek (University of São Paulo, São Paulo, Brazil), and Lucy Reading-Ikkanda (artist).

Syrian archaeological site

Journal Club: In Mesopotamia, early cities may have faltered before climate-driven collapse

Settlements 4,200 years ago may have suffered from overpopulation before drought and lower temperatures ultimately made them unsustainable.

Image credit: Andrea Ricci.

Steamboat Geyser eruption.

Eruption of Steamboat Geyser

Mara Reed and Michael Manga explore why Yellowstone's Steamboat Geyser resumed erupting in 2018.

Past PodcastsSubscribe

Birds nestling on tree branches

Parent–offspring conflict in songbird fledging

Some songbird parents might improve their own fitness by manipulating their offspring into leaving the nest early, at the cost of fledgling survival, a study finds.

Image credit: Gil Eckrich (photographer).

Similar Articles