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Research Article

Modeling when, where, and how to manage a forest epidemic, motivated by sudden oak death in California

Nik J. Cunniffe, Richard C. Cobb, Ross K. Meentemeyer, David M. Rizzo, and Christopher A. Gilligan
PNAS May 17, 2016 113 (20) 5640-5645; first published May 2, 2016; https://doi.org/10.1073/pnas.1602153113
Nik J. Cunniffe
aDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom;
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  • For correspondence: njc1001@cam.ac.uk
Richard C. Cobb
bDepartment of Plant Pathology, University of California, Davis, CA 95616-8751;
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Ross K. Meentemeyer
cDepartment of Forestry and Environmental Resources, North Carolina State University, Raleigh, NC 27607-8002
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David M. Rizzo
bDepartment of Plant Pathology, University of California, Davis, CA 95616-8751;
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Christopher A. Gilligan
aDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom;
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  1. Edited by Simon A. Levin, Princeton University, Princeton, NJ, and approved March 25, 2016 (received for review February 10, 2016)

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Significance

We use sudden oak death in California to illustrate how mathematical modeling can be used to optimize control of established epidemics of invading pathogens in complex heterogeneous landscapes. We use our statewide model—which has been parameterized to pathogen spread data—to address a number of broadly applicable questions. How quickly must management start? When is an epidemic too large to prevent further spread effectively? How should local treatment be deployed? How does this depend on the budget and level of risk aversion? Where should treatment be targeted? How should expenditure be balanced on detection and treatment? What if the budget changes over time? The underlying principles are important for management of all plant disease epidemics in natural ecosystems.

Abstract

Sudden oak death, caused by Phytophthora ramorum, has killed millions of oak and tanoak in California since its first detection in 1995. Despite some localized small-scale management, there has been no large-scale attempt to slow the spread of the pathogen in California. Here we use a stochastic spatially explicit model parameterized using data on the spread of P. ramorum to investigate whether and how the epidemic can be controlled. We find that slowing the spread of P. ramorum is now not possible, and has been impossible for a number of years. However, despite extensive cryptic (i.e., presymptomatic) infection and frequent long-range transmission, effective exclusion of the pathogen from large parts of the state could, in principle, have been possible were it to have been started by 2002. This is the approximate date by which sufficient knowledge of P. ramorum epidemiology had accumulated for large-scale management to be realistic. The necessary expenditure would have been very large, but could have been greatly reduced by optimizing the radius within which infected sites are treated and careful selection of sites to treat. In particular, we find that a dynamic strategy treating sites on the epidemic wave front leads to optimal performance. We also find that “front loading” the budget, that is, treating very heavily at the start of the management program, would greatly improve control. Our work introduces a framework for quantifying the likelihood of success and risks of failure of management that can be applied to invading pests and pathogens threatening forests worldwide.

  • Phytophthora ramorum
  • constrained budget
  • landscape-scale stochastic epidemiological model
  • optimizing disease control
  • risk aversion

Footnotes

  • ↵1To whom correspondence should be addressed. Email: njc1001{at}cam.ac.uk.
  • Author contributions: N.J.C., R.C.C., R.K.M., D.M.R., and C.A.G. designed research; N.J.C. performed research; N.J.C. analyzed data; and N.J.C., R.C.C., R.K.M., D.M.R., and C.A.G. wrote the paper.

  • The authors declare no conflict of interest.

  • This article is a PNAS Direct Submission.

  • This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1602153113/-/DCSupplemental.

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When, where, and whether to manage a plant epidemic
Nik J. Cunniffe, Richard C. Cobb, Ross K. Meentemeyer, David M. Rizzo, Christopher A. Gilligan
Proceedings of the National Academy of Sciences May 2016, 113 (20) 5640-5645; DOI: 10.1073/pnas.1602153113

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When, where, and whether to manage a plant epidemic
Nik J. Cunniffe, Richard C. Cobb, Ross K. Meentemeyer, David M. Rizzo, Christopher A. Gilligan
Proceedings of the National Academy of Sciences May 2016, 113 (20) 5640-5645; DOI: 10.1073/pnas.1602153113
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