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Table of Contents
November 29, 2016; vol. 113 no. 48
This Week in PNAS
Opinion
Leading scientists discuss current issues.
- You have accessOpinion: The dangers of faulty, biased, or malicious algorithms requires independent oversight
- Front Matter
Ben ShneidermanPNAS November 29, 2016 113 (48) 13538-13540; first published November 23, 2016. https://doi.org/10.1073/pnas.1618211113
QnAs
- You have accessQnAs with Steven A. BalbusPaul GabrielsenPNAS November 29, 2016 113 (48) 13541-13542; first published November 15, 2016. https://doi.org/10.1073/pnas.1617014113
See companion article:
- Gravitational wave stress tensor- Oct 03, 2016
- You have accessQnAs with Gerald M. RubinPrashant NairPNAS November 29, 2016 113 (48) 13543-13545; first published November 17, 2016. https://doi.org/10.1073/pnas.1617474113
Profile
- You have accessProfile of Peter A. JonesJennifer ViegasPNAS November 29, 2016 113 (48) 13546-13548; first published November 21, 2016. https://doi.org/10.1073/pnas.1617318113
See companion article:
- Vitamin C increases viral mimicry induced by DNMTi- Aug 29, 2016
PNAS Plus Significance Statements
Brief statements written by the authors about the significance of their papers.
Physical Sciences
Applied Physical Sciences
- You have accessPredicting protein–ligand affinity with a random matrix frameworkAlpha A. Lee, Michael P. Brenner, and Lucy J. ColwellPNAS November 29, 2016 113 (48) 13564-13569; first published November 16, 2016. https://doi.org/10.1073/pnas.1611138113
- Open AccessWind speed reductions by large-scale wind turbine deployments lower turbine efficiencies and set low generation limitsLee M. Miller and Axel KleidonPNAS November 29, 2016 113 (48) 13570-13575; first published November 14, 2016. https://doi.org/10.1073/pnas.1602253113
See companion article:
- Wind resource estimates: More than extrapolation- Oct 12, 2017
- You have accessAchieving high power factor and output power density in p-type half-Heuslers Nb1-xTixFeSbRan He, Daniel Kraemer, Jun Mao, Lingping Zeng, Qing Jie, Yucheng Lan, Chunhua Li, Jing Shuai, Hee Seok Kim, Yuan Liu, David Broido, Ching-Wu Chu, Gang Chen, and Zhifeng RenPNAS November 29, 2016 113 (48) 13576-13581; first published November 15, 2016. https://doi.org/10.1073/pnas.1617663113
- You have accessMolecular mechanism for cavitation in water under tension
- From the Cover
Georg Menzl, Miguel A. Gonzalez, Philipp Geiger, Frédéric Caupin, José L. F. Abascal, Chantal Valeriani, and Christoph DellagoPNAS November 29, 2016 113 (48) 13582-13587; first published November 1, 2016. https://doi.org/10.1073/pnas.1608421113See companion article:
- Homogeneous nucleation- Nov 21, 2016
- You have accessMapping membrane activity in undiscovered peptide sequence space using machine learningErnest Y. Lee, Benjamin M. Fulan, Gerard C. L. Wong, and Andrew L. FergusonPNAS November 29, 2016 113 (48) 13588-13593; first published November 14, 2016. https://doi.org/10.1073/pnas.1609893113
Chemistry
- Open AccessLifestyle chemistries from phones for individual profilingAmina Bouslimani, Alexey V. Melnik, Zhenjiang Xu, Amnon Amir, Ricardo R. da Silva, Mingxun Wang, Nuno Bandeira, Theodore Alexandrov, Rob Knight, and Pieter C. DorresteinPNAS November 29, 2016 113 (48) E7645-E7654; first published November 14, 2016. https://doi.org/10.1073/pnas.1610019113
- You have accessRegional asynchronicity in dairy production and processing in early farming communities of the northern MediterraneanCynthianne Debono Spiteri, Rosalind E. Gillis, Mélanie Roffet-Salque, Laura Castells Navarro, Jean Guilaine, Claire Manen, Italo M. Muntoni, Maria Saña Segui, Dushka Urem-Kotsou, Helen L. Whelton, Oliver E. Craig, Jean-Denis Vigne, and Richard P. EvershedPNAS November 29, 2016 113 (48) 13594-13599; first published November 14, 2016. https://doi.org/10.1073/pnas.1607810113
- You have accessControlling DNA–nanoparticle serum interactionsKyryl Zagorovsky, Leo Y. T. Chou, and Warren C. W. ChanPNAS November 29, 2016 113 (48) 13600-13605; first published November 16, 2016. https://doi.org/10.1073/pnas.1610028113
- You have accessBarrierless association of CF2 and dissociation of C2F4 by variational transition-state theory and system-specific quantum Rice–Ramsperger–Kassel theoryJunwei Lucas Bao, Xin Zhang, and Donald G. TruhlarPNAS November 29, 2016 113 (48) 13606-13611; first published November 10, 2016. https://doi.org/10.1073/pnas.1616208113
- You have accessSynergistic reaction of silver nitrate, silver nanoparticles, and methylene blue against bacteriaRunze Li, Jie Chen, Thomas C. Cesario, Xin Wang, Joshua S. Yuan, and Peter M. RentzepisPNAS November 29, 2016 113 (48) 13612-13617; first published November 14, 2016. https://doi.org/10.1073/pnas.1611193113
- Open AccessMultiple pathways of crystal nucleation in an extremely supersaturated aqueous potassium dihydrogen phosphate (KDP) solution droplet
- From the Cover
Sooheyong Lee, Haeng Sub Wi, Wonhyuk Jo, Yong Chan Cho, Hyun Hwi Lee, Se-Young Jeong, Yong-Il Kim, and Geun Woo LeePNAS November 29, 2016 113 (48) 13618-13623; first published October 24, 2016. https://doi.org/10.1073/pnas.1604938113See companion article:
- Multistep crystallization- Nov 21, 2016
- You have accessDiameter-dependent wetting of tungsten disulfide nanotubesOhad Goldbart, Sidney R. Cohen, Ifat Kaplan-Ashiri, Polina Glazyrina, H. Daniel Wagner, Andrey Enyashin, and Reshef TennePNAS November 29, 2016 113 (48) 13624-13629; first published November 16, 2016. https://doi.org/10.1073/pnas.1607202113
Computer Sciences
- Open AccessUnreasonable effectiveness of learning neural networks: From accessible states and robust ensembles to basic algorithmic schemesCarlo Baldassi, Christian Borgs, Jennifer T. Chayes, Alessandro Ingrosso, Carlo Lucibello, Luca Saglietti, and Riccardo ZecchinaPNAS November 29, 2016 113 (48) E7655-E7662; first published November 15, 2016. https://doi.org/10.1073/pnas.1608103113
Earth, Atmospheric, and Planetary Sciences
- Open AccessPersistent sulfate formation from London Fog to Chinese hazeGehui Wang, Renyi Zhang, Mario E. Gomez, Lingxiao Yang, Misti Levy Zamora, Min Hu, Yun Lin, Jianfei Peng, Song Guo, Jingjing Meng, Jianjun Li, Chunlei Cheng, Tafeng Hu, Yanqin Ren, Yuesi Wang, Jian Gao, Junji Cao, Zhisheng An, Weijian Zhou, Guohui Li, Jiayuan Wang, Pengfei Tian, Wilmarie Marrero-Ortiz, Jeremiah Secrest, Zhuofei Du, Jing Zheng, Dongjie Shang, Limin Zeng, Min Shao, Weigang Wang, Yao Huang, Yuan Wang, Yujiao Zhu, Yixin Li, Jiaxi Hu, Bowen Pan, Li Cai, Yuting Cheng, Yuemeng Ji, Fang Zhang, Daniel Rosenfeld, Peter S. Liss, Robert A. Duce, Charles E. Kolb, and Mario J. MolinaPNAS November 29, 2016 113 (48) 13630-13635; first published November 14, 2016. https://doi.org/10.1073/pnas.1616540113
Engineering
- Open AccessTissue-scale, personalized modeling and simulation of prostate cancer growthGuillermo Lorenzo, Michael A. Scott, Kevin Tew, Thomas J. R. Hughes, Yongjie Jessica Zhang, Lei Liu, Guillermo Vilanova, and Hector GomezPNAS November 29, 2016 113 (48) E7663-E7671; first published November 16, 2016. https://doi.org/10.1073/pnas.1615791113
Environmental Sciences
- Open AccessIdentification and characterization of high methane-emitting abandoned oil and gas wellsMary Kang, Shanna Christian, Michael A. Celia, Denise L. Mauzerall, Markus Bill, Alana R. Miller, Yuheng Chen, Mark E. Conrad, Thomas H. Darrah, and Robert B. JacksonPNAS November 29, 2016 113 (48) 13636-13641; first published November 14, 2016. https://doi.org/10.1073/pnas.1605913113
- You have accessTemperature response of soil respiration largely unaltered with experimental warmingJoanna C. Carey, Jianwu Tang, Pamela H. Templer, Kevin D. Kroeger, Thomas W. Crowther, Andrew J. Burton, Jeffrey S. Dukes, Bridget Emmett, Serita D. Frey, Mary A. Heskel, Lifen Jiang, Megan B. Machmuller, Jacqueline Mohan, Anne Marie Panetta, Peter B. Reich, Sabine Reinsch, Xin Wang, Steven D. Allison, Chris Bamminger, Scott Bridgham, Scott L. Collins, Giovanbattista de Dato, William C. Eddy, Brian J. Enquist, Marc Estiarte, John Harte, Amanda Henderson, Bart R. Johnson, Klaus Steenberg Larsen, Yiqi Luo, Sven Marhan, Jerry M. Melillo, Josep Peñuelas, Laurel Pfeifer-Meister, Christian Poll, Edward Rastetter, Andrew B. Reinmann, Lorien L. Reynolds, Inger K. Schmidt, Gaius R. Shaver, Aaron L. Strong, Vidya Suseela, and Albert TietemaPNAS November 29, 2016 113 (48) 13797-13802; first published November 14, 2016. https://doi.org/10.1073/pnas.1605365113
Physics
- You have accessQuantum entanglement of angular momentum states with quantum numbers up to 10,010Robert Fickler, Geoff Campbell, Ben Buchler, Ping Koy Lam, and Anton ZeilingerPNAS November 29, 2016 113 (48) 13642-13647; first published November 15, 2016. https://doi.org/10.1073/pnas.1616889113
See companion article:
- Twisted light transmission over 143 km- Nov 15, 2016
- You have accessTwisted light transmission over 143 kmMario Krenn, Johannes Handsteiner, Matthias Fink, Robert Fickler, Rupert Ursin, Mehul Malik, and Anton ZeilingerPNAS November 29, 2016 113 (48) 13648-13653; first published November 15, 2016. https://doi.org/10.1073/pnas.1612023113
See companion article:
- Entanglement with quantum numbers up to 10,010- Nov 15, 2016
- You have accessFermi liquid behavior of the in-plane resistivity in the pseudogap state of YBa2Cu4O8Cyril Proust, Baptiste Vignolle, Julien Levallois, S. Adachi, and Nigel E. HusseyPNAS November 29, 2016 113 (48) 13654-13659; first published November 16, 2016. https://doi.org/10.1073/pnas.1602709113
- Open AccessAnomalous dynamics of interstitial dopants in soft crystalsJustin Tauber, Ruben Higler, and Joris SprakelPNAS November 29, 2016 113 (48) 13660-13665; first published November 17, 2016. https://doi.org/10.1073/pnas.1609595113
Sustainability Science
- Open AccessLife cycle greenhouse gas emissions and freshwater consumption associated with Bakken tight oilIan J. Laurenzi, Joule A. Bergerson, and Kavan MotazediPNAS November 29, 2016 113 (48) E7672-E7680; first published November 14, 2016. https://doi.org/10.1073/pnas.1607475113
Social Sciences
Anthropology
- You have accessPhylogenetic approach to the evolution of color term systemsHannah J. Haynie and Claire BowernPNAS November 29, 2016 113 (48) 13666-13671; first published November 14, 2016. https://doi.org/10.1073/pnas.1613666113
See companion article:
- Color terms are lost, despite missing data- Sep 14, 2017
- You have accessLate Archaic–Early Formative period microbotanical evidence for potato at Jiskairumoko in the Titicaca Basin of southern PeruClaudia Ursula Rumold and Mark S. AldenderferPNAS November 29, 2016 113 (48) 13672-13677; first published November 14, 2016. https://doi.org/10.1073/pnas.1604265113
Economic Sciences
- You have accessUniversal screening increases the representation of low-income and minority students in gifted educationDavid Card and Laura GiulianoPNAS November 29, 2016 113 (48) 13678-13683; first published November 15, 2016. https://doi.org/10.1073/pnas.1605043113
Environmental Sciences
- You have accessSocioecological transitions trigger fire regime shifts and modulate fire–climate interactions in the Sierra Nevada, USA, 1600–2015 CEAlan H. Taylor, Valerie Trouet, Carl N. Skinner, and Scott StephensPNAS November 29, 2016 113 (48) 13684-13689; first published November 14, 2016. https://doi.org/10.1073/pnas.1609775113
Political Sciences
- You have accessEffect of holding office on the behavior of politiciansDaniel Enemark, Clark C. Gibson, Mathew D. McCubbins, and Brigitte SeimPNAS November 29, 2016 113 (48) 13690-13695; first published November 15, 2016. https://doi.org/10.1073/pnas.1511501113
Psychological and Cognitive Sciences
- You have accessStatistics of natural reverberation enable perceptual separation of sound and spaceJames Traer and Josh H. McDermottPNAS November 29, 2016 113 (48) E7856-E7865; first published November 10, 2016. https://doi.org/10.1073/pnas.1612524113
- You have accessAdolescents growing up amidst intractable conflict attenuate brain response to pain of outgroupJonathan Levy, Abraham Goldstein, Moran Influs, Shafiq Masalha, Orna Zagoory-Sharon, and Ruth FeldmanPNAS November 29, 2016 113 (48) 13696-13701; first published November 14, 2016. https://doi.org/10.1073/pnas.1612903113
- You have accessThe double identity of linguistic doublingIris Berent, Outi Bat-El, Diane Brentari, Amanda Dupuis, and Vered Vaknin-NusbaumPNAS November 29, 2016 113 (48) 13702-13707; first published November 11, 2016. https://doi.org/10.1073/pnas.1613749113
Sustainability Science
- Open AccessWind speed reductions by large-scale wind turbine deployments lower turbine efficiencies and set low generation limitsLee M. Miller and Axel KleidonPNAS November 29, 2016 113 (48) 13570-13575; first published November 14, 2016. https://doi.org/10.1073/pnas.1602253113
See companion article:
- Wind resource estimates: More than extrapolation- Oct 12, 2017
- Open AccessIdentification and characterization of high methane-emitting abandoned oil and gas wellsMary Kang, Shanna Christian, Michael A. Celia, Denise L. Mauzerall, Markus Bill, Alana R. Miller, Yuheng Chen, Mark E. Conrad, Thomas H. Darrah, and Robert B. JacksonPNAS November 29, 2016 113 (48) 13636-13641; first published November 14, 2016. https://doi.org/10.1073/pnas.1605913113
- You have accessSocioecological transitions trigger fire regime shifts and modulate fire–climate interactions in the Sierra Nevada, USA, 1600–2015 CEAlan H. Taylor, Valerie Trouet, Carl N. Skinner, and Scott StephensPNAS November 29, 2016 113 (48) 13684-13689; first published November 14, 2016. https://doi.org/10.1073/pnas.1609775113
- Open AccessMultiplex social ecological network analysis reveals how social changes affect community robustness more than resource depletionJacopo A. Baggio, Shauna B. BurnSilver, Alex Arenas, James S. Magdanz, Gary P. Kofinas, and Manlio De DomenicoPNAS November 29, 2016 113 (48) 13708-13713; first published November 16, 2016. https://doi.org/10.1073/pnas.1604401113
Social Sciences
- Open AccessThe emergence of longevous populations
- Cozzarelli Prize Winner
Fernando Colchero, Roland Rau, Owen R. Jones, Julia A. Barthold, Dalia A. Conde, Adam Lenart, Laszlo Nemeth, Alexander Scheuerlein, Jonas Schoeley, Catalina Torres, Virginia Zarulli, Jeanne Altmann, Diane K. Brockman, Anne M. Bronikowski, Linda M. Fedigan, Anne E. Pusey, Tara S. Stoinski, Karen B. Strier, Annette Baudisch, Susan C. Alberts, and James W. VaupelPNAS November 29, 2016 113 (48) E7681-E7690; first published November 21, 2016. https://doi.org/10.1073/pnas.1612191113
Biological Sciences
Anthropology
- You have accessRegional asynchronicity in dairy production and processing in early farming communities of the northern MediterraneanCynthianne Debono Spiteri, Rosalind E. Gillis, Mélanie Roffet-Salque, Laura Castells Navarro, Jean Guilaine, Claire Manen, Italo M. Muntoni, Maria Saña Segui, Dushka Urem-Kotsou, Helen L. Whelton, Oliver E. Craig, Jean-Denis Vigne, and Richard P. EvershedPNAS November 29, 2016 113 (48) 13594-13599; first published November 14, 2016. https://doi.org/10.1073/pnas.1607810113
Biochemistry
- You have accessMolecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motorNathan D. Thomsen, Michael R. Lawson, Lea B. Witkowsky, Song Qu, and James M. BergerPNAS November 29, 2016 113 (48) E7691-E7700; first published November 16, 2016. https://doi.org/10.1073/pnas.1616745113
See companion article:
- Substrate loading control in a hexameric helicase- Nov 07, 2016
- You have accessLigand-induced and small-molecule control of substrate loading in a hexameric helicaseMichael R. Lawson, Kevin Dyer, and James M. BergerPNAS November 29, 2016 113 (48) 13714-13719; first published November 7, 2016. https://doi.org/10.1073/pnas.1616749113
See companion article:
- Ring dynamics and substepping in a hexameric motor- Nov 16, 2016
- You have accessTetraphenylethene-based highly emissive metallacage as a component of theranostic supramolecular nanoparticlesGuocan Yu, Timothy R. Cook, Yang Li, Xuzhou Yan, Dan Wu, Li Shao, Jie Shen, Guping Tang, Feihe Huang, Xiaoyuan Chen, and Peter J. StangPNAS November 29, 2016 113 (48) 13720-13725; first published November 15, 2016. https://doi.org/10.1073/pnas.1616836113
- Open AccessStructural basis of N-Myc binding by Aurora-A and its destabilization by kinase inhibitorsMark W. Richards, Selena G. Burgess, Evon Poon, Anne Carstensen, Martin Eilers, Louis Chesler, and Richard BaylissPNAS November 29, 2016 113 (48) 13726-13731; first published November 11, 2016. https://doi.org/10.1073/pnas.1610626113
- You have accessGlobal transformation of erythrocyte properties via engagement of an SH2-like sequence in band 3Estela Puchulu-Campanella, Francesco M. Turrini, Yen-Hsing Li, and Philip S. LowPNAS November 29, 2016 113 (48) 13732-13737; first published November 15, 2016. https://doi.org/10.1073/pnas.1611904113
- You have accessTopic modeling for untargeted substructure exploration in metabolomicsJustin Johan Jozias van der Hooft, Joe Wandy, Michael P. Barrett, Karl E. V. Burgess, and Simon RogersPNAS November 29, 2016 113 (48) 13738-13743; first published November 16, 2016. https://doi.org/10.1073/pnas.1608041113
- Open AccessTwo proofreading steps amplify the accuracy of genetic code translationKa-Weng Ieong, Ülkü Uzun, Maria Selmer, and Måns EhrenbergPNAS November 29, 2016 113 (48) 13744-13749; first published November 11, 2016. https://doi.org/10.1073/pnas.1610917113
- You have accessAn HD domain phosphohydrolase active site tailored for oxetanocin-A biosynthesisJennifer Bridwell-Rabb, Gyunghoon Kang, Aoshu Zhong, Hung-wen Liu, and Catherine L. DrennanPNAS November 29, 2016 113 (48) 13750-13755; first published November 14, 2016. https://doi.org/10.1073/pnas.1613610113
- You have accessNeutron structures of the Helicobacter pylori 5′-methylthioadenosine nucleosidase highlight proton sharing and protonation statesMichael T. Banco, Vidhi Mishra, Andreas Ostermann, Tobias E. Schrader, Gary B. Evans, Andrey Kovalevsky, and Donald R. RonningPNAS November 29, 2016 113 (48) 13756-13761; first published November 16, 2016. https://doi.org/10.1073/pnas.1609718113
Biophysics and Computational Biology
- You have accessPredicting protein–ligand affinity with a random matrix frameworkAlpha A. Lee, Michael P. Brenner, and Lucy J. ColwellPNAS November 29, 2016 113 (48) 13564-13569; first published November 16, 2016. https://doi.org/10.1073/pnas.1611138113
- Open AccessFluorine-19 NMR and computational quantification of isoflurane binding to the voltage-gated sodium channel NaChBacMonica N. Kinde, Vasyl Bondarenko, Daniele Granata, Weiming Bu, Kimberly C. Grasty, Patrick J. Loll, Vincenzo Carnevale, Michael L. Klein, Roderic G. Eckenhoff, Pei Tang, and Yan XuPNAS November 29, 2016 113 (48) 13762-13767; first published November 15, 2016. https://doi.org/10.1073/pnas.1609939113
- Open AccessGlobal analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancersBabak Alaei-Mahabadi, Joydeep Bhadury, Joakim W. Karlsson, Jonas A. Nilsson, and Erik LarssonPNAS November 29, 2016 113 (48) 13768-13773; first published November 16, 2016. https://doi.org/10.1073/pnas.1606220113
Cell Biology
- You have accessTwo familial ALS proteins function in prevention/repair of transcription-associated DNA damageSarah J. Hill, Daniel A. Mordes, Lisa A. Cameron, Donna S. Neuberg, Serena Landini, Kevin Eggan, and David M. LivingstonPNAS November 29, 2016 113 (48) E7701-E7709; first published November 14, 2016. https://doi.org/10.1073/pnas.1611673113
- You have accessDNA polymerase ζ limits chromosomal damage and promotes cell survival following aflatoxin exposureYing-Chih Lin, Nichole Owen, Irina G. Minko, Sabine S. Lange, Junya Tomida, Liang Li, Michael P. Stone, Richard D. Wood, Amanda K. McCullough, and R. Stephen LloydPNAS November 29, 2016 113 (48) 13774-13779; first published November 14, 2016. https://doi.org/10.1073/pnas.1609024113
Developmental Biology
- Open AccessNotch1 controls development of the extravillous trophoblast lineage in the human placentaSandra Haider, Gudrun Meinhardt, Leila Saleh, Christian Fiala, Jürgen Pollheimer, and Martin KnöflerPNAS November 29, 2016 113 (48) E7710-E7719; first published November 14, 2016. https://doi.org/10.1073/pnas.1612335113
- Open AccessControl of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscapeRuben Schep, Anamaria Necsulea, Eddie Rodríguez-Carballo, Isabel Guerreiro, Guillaume Andrey, Thi Hanh Nguyen Huynh, Virginie Marcet, Jozsef Zákány, Denis Duboule, and Leonardo BeccariPNAS November 29, 2016 113 (48) E7720-E7729; first published November 15, 2016. https://doi.org/10.1073/pnas.1617141113
Ecology
- Open AccessPredators catalyze an increase in chloroviruses by foraging on the symbiotic hosts of zoochlorellaeJohn P. DeLong, Zeina Al-Ameeli, Garry Duncan, James L. Van Etten, and David D. DuniganPNAS November 29, 2016 113 (48) 13780-13784; first published November 7, 2016. https://doi.org/10.1073/pnas.1613843113
- Open AccessGlobal patterns of kelp forest change over the past half-centuryKira A. Krumhansl, Daniel K. Okamoto, Andrew Rassweiler, Mark Novak, John J. Bolton, Kyle C. Cavanaugh, Sean D. Connell, Craig R. Johnson, Brenda Konar, Scott D. Ling, Fiorenza Micheli, Kjell M. Norderhaug, Alejandro Pérez-Matus, Isabel Sousa-Pinto, Daniel C. Reed, Anne K. Salomon, Nick T. Shears, Thomas Wernberg, Robert J. Anderson, Nevell S. Barrett, Alejandro H. Buschmann, Mark H. Carr, Jennifer E. Caselle, Sandrine Derrien-Courtel, Graham J. Edgar, Matt Edwards, James A. Estes, Claire Goodwin, Michael C. Kenner, David J. Kushner, Frithjof E. Moy, Julia Nunn, Robert S. Steneck, Julio Vásquez, Jane Watson, Jon D. Witman, and Jarrett E. K. ByrnesPNAS November 29, 2016 113 (48) 13785-13790; first published November 14, 2016. https://doi.org/10.1073/pnas.1606102113
- You have accessLong-term empirical evidence of ocean warming leading to tropicalization of fish communities, increased herbivory, and loss of kelpAdriana Vergés, Christopher Doropoulos, Hamish A. Malcolm, Mathew Skye, Marina Garcia-Pizá, Ezequiel M. Marzinelli, Alexandra H. Campbell, Enric Ballesteros, Andrew S. Hoey, Ana Vila-Concejo, Yves-Marie Bozec, and Peter D. SteinbergPNAS November 29, 2016 113 (48) 13791-13796; first published November 14, 2016. https://doi.org/10.1073/pnas.1610725113
Environmental Sciences
- You have accessTemperature response of soil respiration largely unaltered with experimental warmingJoanna C. Carey, Jianwu Tang, Pamela H. Templer, Kevin D. Kroeger, Thomas W. Crowther, Andrew J. Burton, Jeffrey S. Dukes, Bridget Emmett, Serita D. Frey, Mary A. Heskel, Lifen Jiang, Megan B. Machmuller, Jacqueline Mohan, Anne Marie Panetta, Peter B. Reich, Sabine Reinsch, Xin Wang, Steven D. Allison, Chris Bamminger, Scott Bridgham, Scott L. Collins, Giovanbattista de Dato, William C. Eddy, Brian J. Enquist, Marc Estiarte, John Harte, Amanda Henderson, Bart R. Johnson, Klaus Steenberg Larsen, Yiqi Luo, Sven Marhan, Jerry M. Melillo, Josep Peñuelas, Laurel Pfeifer-Meister, Christian Poll, Edward Rastetter, Andrew B. Reinmann, Lorien L. Reynolds, Inger K. Schmidt, Gaius R. Shaver, Aaron L. Strong, Vidya Suseela, and Albert TietemaPNAS November 29, 2016 113 (48) 13797-13802; first published November 14, 2016. https://doi.org/10.1073/pnas.1605365113
Evolution
- You have accessOrigins of the current seventh cholera pandemicDalong Hu, Bin Liu, Lu Feng, Peng Ding, Xi Guo, Min Wang, Boyang Cao, Peter R. Reeves, and Lei WangPNAS November 29, 2016 113 (48) E7730-E7739; first published November 14, 2016. https://doi.org/10.1073/pnas.1608732113
- You have accessEvolution of directional hearing in moths via conversion of bat detection devices to asymmetric pressure gradient receiversAndrew Reid, Thibaut Marin-Cudraz, James F. C. Windmill, and Michael D. GreenfieldPNAS November 29, 2016 113 (48) E7740-E7748; first published November 14, 2016. https://doi.org/10.1073/pnas.1615691113
- Open AccessSibling conflict and dishonest signaling in birds
- From the Cover
Shana M. Caro, Stuart A. West, and Ashleigh S. GriffinPNAS November 29, 2016 113 (48) 13803-13808; first published November 7, 2016. https://doi.org/10.1073/pnas.1606378113See companion article:
- Begging, bragging, and deceit- Nov 21, 2016
Genetics
- Open AccessTransposon mutagenesis identifies genes that cooperate with mutant Pten in breast cancer progressionRoberto Rangel, Song-Choon Lee, Kenneth Hon-Kim Ban, Liliana Guzman-Rojas, Michael B. Mann, Justin Y. Newberg, Takahiro Kodama, Leslie A. McNoe, Luxmanan Selvanesan, Jerrold M. Ward, Alistair G. Rust, Kuan-Yew Chin, Michael A. Black, Nancy A. Jenkins, and Neal G. CopelandPNAS November 29, 2016 113 (48) E7749-E7758; first published November 14, 2016. https://doi.org/10.1073/pnas.1613859113
- Open AccessMultiple mechanisms contribute to double-strand break repair at rereplication forks in Drosophila follicle cellsJessica L. Alexander, Kelly Beagan, Terry L. Orr-Weaver, and Mitch McVeyPNAS November 29, 2016 113 (48) 13809-13814; first published November 14, 2016. https://doi.org/10.1073/pnas.1617110113
- Open AccessDuplication of chicken defensin7 gene generated by gene conversion and homologous recombinationMi Ok Lee, Susanne Bornelöv, Leif Andersson, Susan J. Lamont, Junfeng Chen, and James E. WomackPNAS November 29, 2016 113 (48) 13815-13820; first published November 14, 2016. https://doi.org/10.1073/pnas.1616948113
Immunology and Inflammation
- You have accessDensity of immunogenic antigens does not explain the presence or absence of the T-cell–inflamed tumor microenvironment in melanomaStefani Spranger, Jason J. Luke, Riyue Bao, Yuanyuan Zha, Kyle M. Hernandez, Yan Li, Alexander P. Gajewski, Jorge Andrade, and Thomas F. GajewskiPNAS November 29, 2016 113 (48) E7759-E7768; first published November 11, 2016. https://doi.org/10.1073/pnas.1609376113
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- PD-1/PD-L, cytolytic activity, and mutational load- Nov 11, 2016
- You have accessAssociation of PD-1/PD-L axis expression with cytolytic activity, mutational load, and prognosis in melanoma and other solid tumorsLudmila Danilova, Hao Wang, Joel Sunshine, Genevieve J. Kaunitz, Tricia R. Cottrell, Haiying Xu, Jessica Esandrio, Robert A. Anders, Leslie Cope, Drew M. Pardoll, Charles G. Drake, and Janis M. TaubePNAS November 29, 2016 113 (48) E7769-E7777; first published November 11, 2016. https://doi.org/10.1073/pnas.1607836113
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- Antigen-density inflamed vs. noninflamed tumors- Nov 11, 2016
- You have accessTrypanosoma brucei metabolite indolepyruvate decreases HIF-1α and glycolysis in macrophages as a mechanism of innate immune evasionAnne F. McGettrick, Sarah E. Corcoran, Paul J. G. Barry, Jennifer McFarland, Cécile Crès, Anne M. Curtis, Edward Franklin, Sinéad C. Corr, K. Hun Mok, Eoin P. Cummins, Cormac T. Taylor, Luke A. J. O’Neill, and Derek P. NolanPNAS November 29, 2016 113 (48) E7778-E7787; first published November 15, 2016. https://doi.org/10.1073/pnas.1608221113
- Open AccessTethered IL-15 augments antitumor activity and promotes a stem-cell memory subset in tumor-specific T cellsLenka V. Hurton, Harjeet Singh, Amer M. Najjar, Kirsten C. Switzer, Tiejuan Mi, Sourindra Maiti, Simon Olivares, Brian Rabinovich, Helen Huls, Marie-Andrée Forget, Vrushali Datar, Partow Kebriaei, Dean A. Lee, Richard E. Champlin, and Laurence J. N. CooperPNAS November 29, 2016 113 (48) E7788-E7797; first published November 14, 2016. https://doi.org/10.1073/pnas.1610544113
- Open AccessIn vivo amelioration of endogenous antitumor autoantibodies via low-dose P4N through the LTA4H/activin A/BAFF pathwayYu-Ling Lin, Nu-Man Tsai, Cheng-Hao Hsieh, Shu-Yi Ho, Jung Chang, Hsin-Yi Wu, Ming-Hua Hsu, Chia-Ching Chang, Kuang-Wen Liao, Tiffany L. B. Jackson, David E. Mold, and Ru Chih C. HuangPNAS November 29, 2016 113 (48) E7798-E7807; first published November 17, 2016. https://doi.org/10.1073/pnas.1604752113
- You have accessMouse model for acute Epstein–Barr virus infectionTristan Wirtz, Timm Weber, Sven Kracker, Thomas Sommermann, Klaus Rajewsky, and Tomoharu YasudaPNAS November 29, 2016 113 (48) 13821-13826; first published November 16, 2016. https://doi.org/10.1073/pnas.1616574113
- You have accessGraft versus self (GvS) against T-cell autoantigens is a mechanism of graft–host interactionNora Mirza, Manfred Zierhut, Andreas Korn, Antje Bornemann, Wichard Vogel, Barbara Schmid-Horch, Wolfgang A. Bethge, Stefan Stevanović, Helmut R. Salih, Lothar Kanz, Hans-Georg Rammensee, and Sebastian P. HaenPNAS November 29, 2016 113 (48) 13827-13832; first published November 10, 2016. https://doi.org/10.1073/pnas.1609118113
- Open AccessGram-positive bacteria are held at a distance in the colon mucus by the lectin-like protein ZG16Joakim H. Bergström, George M. H. Birchenough, Gergely Katona, Bjoern O. Schroeder, André Schütte, Anna Ermund, Malin E. V. Johansson, and Gunnar C. HanssonPNAS November 29, 2016 113 (48) 13833-13838; first published November 14, 2016. https://doi.org/10.1073/pnas.1611400113
Medical Sciences
- You have accessHeparanase is required for activation and function of macrophagesLilach Gutter-Kapon, Dror Alishekevitz, Yuval Shaked, Jin-Ping Li, Ami Aronheim, Neta Ilan, and Israel VlodavskyPNAS November 29, 2016 113 (48) E7808-E7817; first published November 14, 2016. https://doi.org/10.1073/pnas.1611380113
- You have accessControlling DNA–nanoparticle serum interactionsKyryl Zagorovsky, Leo Y. T. Chou, and Warren C. W. ChanPNAS November 29, 2016 113 (48) 13600-13605; first published November 16, 2016. https://doi.org/10.1073/pnas.1610028113
- Open AccessDisparities in influenza mortality and transmission related to sociodemographic factors within Chicago in the pandemic of 1918
- From the Cover
Kyra H. Grantz, Madhura S. Rane, Henrik Salje, Gregory E. Glass, Stephen E. Schachterle, and Derek A. T. CummingsPNAS November 29, 2016 113 (48) 13839-13844; first published November 21, 2016. https://doi.org/10.1073/pnas.1612838113See companion article:
- 1918 pandemic flu and socioeconomic disparities- Nov 22, 2016
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- Mechanisms of pandemic mortality disparities- Apr 06, 2017
- Open AccessEpipolymorphisms associated with the clinical outcome of autoimmune arthritis affect CD4+ T cell activation pathwaysRoberto Spreafico, Maura Rossetti, John W. Whitaker, Wei Wang, Daniel J. Lovell, and Salvatore AlbaniPNAS November 29, 2016 113 (48) 13845-13850; first published November 14, 2016. https://doi.org/10.1073/pnas.1524056113
- You have accessAmyloid fibrils from the N-terminal prion protein fragment are infectiousJin-Kyu Choi, Ignazio Cali, Krystyna Surewicz, Qingzhong Kong, Pierluigi Gambetti, and Witold K. SurewiczPNAS November 29, 2016 113 (48) 13851-13856; first published November 14, 2016. https://doi.org/10.1073/pnas.1610716113
- You have accessNanoparticle engineered TRAIL-overexpressing adipose-derived stem cells target and eradicate glioblastoma via intracranial deliveryXinyi Jiang, Sergio Fitch, Christine Wang, Christy Wilson, Jianfeng Li, Gerald A. Grant, and Fan YangPNAS November 29, 2016 113 (48) 13857-13862; first published November 14, 2016. https://doi.org/10.1073/pnas.1615396113
Microbiology
- You have accessRole of nucleotide-binding oligomerization domain 1 (NOD1) and its variants in human cytomegalovirus control in vitro and in vivoYi-Hsin Fan, Sujayita Roy, Rupkatha Mukhopadhyay, Arun Kapoor, Priya Duggal, Genevieve L. Wojcik, Robert F. Pass, and Ravit Arav-BogerPNAS November 29, 2016 113 (48) E7818-E7827; first published November 16, 2016. https://doi.org/10.1073/pnas.1611711113
- Open AccessYellow fever virus capsid protein is a potent suppressor of RNA silencing that binds double-stranded RNAGlady Hazitha Samuel, Michael R. Wiley, Atif Badawi, Zach N. Adelman, and Kevin M. MylesPNAS November 29, 2016 113 (48) 13863-13868; first published November 14, 2016. https://doi.org/10.1073/pnas.1600544113
- Open AccessStructural and functional analysis of an anchorless fibronectin-binding protein FBPS from Gram-positive bacterium Streptococcus suisAbednego Moki Musyoki, Zhongyu Shi, Chunling Xuan, Guangwen Lu, Jianxun Qi, Feng Gao, Beiwen Zheng, Qiangmin Zhang, Yan Li, Joel Haywood, Cuihua Liu, Jinghua Yan, Yi Shi, and George F. GaoPNAS November 29, 2016 113 (48) 13869-13874; first published November 10, 2016. https://doi.org/10.1073/pnas.1608406113
- You have accessPlant nodulation inducers enhance horizontal gene transfer of Azorhizobium caulinodans symbiosis islandJun Ling, Hui Wang, Ping Wu, Tao Li, Yu Tang, Nawar Naseer, Huiming Zheng, Catherine Masson-Boivin, Zengtao Zhong, and Jun ZhuPNAS November 29, 2016 113 (48) 13875-13880; first published November 14, 2016. https://doi.org/10.1073/pnas.1615121113
- Open AccessArmed conflict and population displacement as drivers of the evolution and dispersal of Mycobacterium tuberculosisVegard Eldholm, John H.-O. Pettersson, Ola B. Brynildsrud, Andrew Kitchen, Erik Michael Rasmussen, Troels Lillebaek, Janne O. Rønning, Valeriu Crudu, Anne Torunn Mengshoel, Nadia Debech, Kristian Alfsnes, Jon Bohlin, Caitlin S. Pepperell, and Francois BallouxPNAS November 29, 2016 113 (48) 13881-13886; first published November 21, 2016. https://doi.org/10.1073/pnas.1611283113
- You have accessGenome-wide screen identifies host colonization determinants in a bacterial gut symbiontJ. Elijah Powell, Sean P. Leonard, Waldan K. Kwong, Philipp Engel, and Nancy A. MoranPNAS November 29, 2016 113 (48) 13887-13892; first published November 14, 2016. https://doi.org/10.1073/pnas.1610856113
Neuroscience
- You have accessVEGF preconditioning leads to stem cell remodeling and attenuates age-related decay of adult hippocampal neurogenesisTamar Licht, Gadiel Rothe, Tirzah Kreisel, Brachi Wolf, Ofra Benny, Alasdair G. Rooney, Charles ffrench-Constant, Grigori Enikolopov, and Eli KeshetPNAS November 29, 2016 113 (48) E7828-E7836; first published November 14, 2016. https://doi.org/10.1073/pnas.1609592113
- You have accessCircadian rhythms identified in Caenorhabditis elegans by in vivo long-term monitoring of a bioluminescent reporterMaría Eugenia Goya, Andrés Romanowski, Carlos S. Caldart, Claire Y. Bénard, and Diego A. GolombekPNAS November 29, 2016 113 (48) E7837-E7845; first published November 14, 2016. https://doi.org/10.1073/pnas.1605769113
- You have accessEndogenous central amygdala mu-opioid receptor signaling promotes sodium appetite in miceCraig M. Smith, Lesley L. Walker, Tanawan Leeboonngam, Michael J. McKinley, Derek A. Denton, and Andrew J. LawrencePNAS November 29, 2016 113 (48) 13893-13898; first published November 14, 2016. https://doi.org/10.1073/pnas.1616664113
- You have accessSpontaneous default network activity reflects behavioral variability independent of mind-wanderingAaron Kucyi, Michael Esterman, Clay S. Riley, and Eve M. ValeraPNAS November 29, 2016 113 (48) 13899-13904; first published November 15, 2016. https://doi.org/10.1073/pnas.1611743113
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- Fitting data to neural models of mind-wandering- Jul 13, 2017
Physiology
- You have accessAtomic determinants of BK channel activation by polyunsaturated fatty acidsYutao Tian, Marius Aursnes, Trond Vidar Hansen, Jørn Eivind Tungen, Jason D. Galpin, Lilia Leisle, Christopher A. Ahern, Rong Xu, Stefan H. Heinemann, and Toshinori HoshiPNAS November 29, 2016 113 (48) 13905-13910; first published November 14, 2016. https://doi.org/10.1073/pnas.1615562113
Plant Biology
- You have accessControl of seed dormancy in Arabidopsis by a cis-acting noncoding antisense transcriptHalina Fedak, Malgorzata Palusinska, Katarzyna Krzyczmonik, Lien Brzezniak, Ruslan Yatusevich, Zbigniew Pietras, Szymon Kaczanowski, and Szymon SwiezewskiPNAS November 29, 2016 113 (48) E7846-E7855; first published November 15, 2016. https://doi.org/10.1073/pnas.1608827113
- You have accessStanding genetic variation in a tissue-specific enhancer underlies selfing-syndrome evolution in Capsella
- From the Cover
Adrien Sicard, Christian Kappel, Young Wha Lee, Natalia Joanna Woźniak, Cindy Marona, John R. Stinchcombe, Stephen I. Wright, and Michael LenhardPNAS November 29, 2016 113 (48) 13911-13916; first published November 14, 2016. https://doi.org/10.1073/pnas.1613394113 - You have accessArabidopsis thaliana GH3.5 acyl acid amido synthetase mediates metabolic crosstalk in auxin and salicylic acid homeostasisCorey S. Westfall, Ashley M. Sherp, Chloe Zubieta, Sophie Alvarez, Evelyn Schraft, Romain Marcellin, Loren Ramirez, and Joseph M. JezPNAS November 29, 2016 113 (48) 13917-13922; first published November 14, 2016. https://doi.org/10.1073/pnas.1612635113
Psychological and Cognitive Sciences
- You have accessStatistics of natural reverberation enable perceptual separation of sound and spaceJames Traer and Josh H. McDermottPNAS November 29, 2016 113 (48) E7856-E7865; first published November 10, 2016. https://doi.org/10.1073/pnas.1612524113
- You have accessCortical networks involved in visual awareness independent of visual attentionTaylor W. Webb, Kajsa M. Igelström, Aaron Schurger, and Michael S. A. GrazianoPNAS November 29, 2016 113 (48) 13923-13928; first published November 14, 2016. https://doi.org/10.1073/pnas.1611505113
Corrections (Online Only)
- You have accessCorrection for Sakata et al., Voltage-dependent motion of the catalytic region of voltage-sensing phosphatase monitored by a fluorescent amino acidPNAS November 29, 2016 113 (48) E7866; first published November 14, 2016. https://doi.org/10.1073/pnas.1617861113
- You have accessCorrection for Delgehyr et al., Drosophila Mgr, a Prefoldin subunit cooperating with von Hippel Lindau to regulate tubulin stabilityPNAS November 29, 2016 113 (48) E7867-E7868; first published November 14, 2016. https://doi.org/10.1073/pnas.1617441113
- You have accessCorrection for Coates et al., Wildfire, climate, and invasive grass interactions negatively impact an indicator species by reshaping sagebrush ecosystemsPNAS November 29, 2016 113 (48) E7869; first published November 9, 2016. https://doi.org/10.1073/pnas.1617905113
SI Correction (Online Only)
- You have accessCorrection to Supporting Information for Biswas et al., E-cadherin junction formation involves an active kinetic nucleation processPNAS November 29, 2016 113 (48) E7870; first published November 14, 2016. https://doi.org/10.1073/pnas.1617361113
Commentaries
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