Skip to main content
  • Submit
  • About
    • Editorial Board
    • PNAS Staff
    • FAQ
    • Accessibility Statement
    • Rights and Permissions
    • Site Map
  • Contact
  • Journal Club
  • Subscribe
    • Subscription Rates
    • Subscriptions FAQ
    • Open Access
    • Recommend PNAS to Your Librarian
  • Log in
  • My Cart

Main menu

  • Home
  • Articles
    • Current
    • Special Feature Articles - Most Recent
    • Special Features
    • Colloquia
    • Collected Articles
    • PNAS Classics
    • List of Issues
  • Front Matter
  • News
    • For the Press
    • This Week In PNAS
    • PNAS in the News
  • Podcasts
  • Authors
    • Information for Authors
    • Editorial and Journal Policies
    • Submission Procedures
    • Fees and Licenses
  • Submit
  • About
    • Editorial Board
    • PNAS Staff
    • FAQ
    • Accessibility Statement
    • Rights and Permissions
    • Site Map
  • Contact
  • Journal Club
  • Subscribe
    • Subscription Rates
    • Subscriptions FAQ
    • Open Access
    • Recommend PNAS to Your Librarian

User menu

  • Log in
  • My Cart

Search

  • Advanced search
Home
Home

Advanced Search

  • Home
  • Articles
    • Current
    • Special Feature Articles - Most Recent
    • Special Features
    • Colloquia
    • Collected Articles
    • PNAS Classics
    • List of Issues
  • Front Matter
  • News
    • For the Press
    • This Week In PNAS
    • PNAS in the News
  • Podcasts
  • Authors
    • Information for Authors
    • Editorial and Journal Policies
    • Submission Procedures
    • Fees and Licenses

New Research In

Physical Sciences

Featured Portals

  • Physics
  • Chemistry
  • Sustainability Science

Articles by Topic

  • Applied Mathematics
  • Applied Physical Sciences
  • Astronomy
  • Computer Sciences
  • Earth, Atmospheric, and Planetary Sciences
  • Engineering
  • Environmental Sciences
  • Mathematics
  • Statistics

Social Sciences

Featured Portals

  • Anthropology
  • Sustainability Science

Articles by Topic

  • Economic Sciences
  • Environmental Sciences
  • Political Sciences
  • Psychological and Cognitive Sciences
  • Social Sciences

Biological Sciences

Featured Portals

  • Sustainability Science

Articles by Topic

  • Agricultural Sciences
  • Anthropology
  • Applied Biological Sciences
  • Biochemistry
  • Biophysics and Computational Biology
  • Cell Biology
  • Developmental Biology
  • Ecology
  • Environmental Sciences
  • Evolution
  • Genetics
  • Immunology and Inflammation
  • Medical Sciences
  • Microbiology
  • Neuroscience
  • Pharmacology
  • Physiology
  • Plant Biology
  • Population Biology
  • Psychological and Cognitive Sciences
  • Sustainability Science
  • Systems Biology
Research Article

Structure and mechanotransmission mechanism of the MacB ABC transporter superfamily

View ORCID ProfileAllister Crow, Nicholas P. Greene, View ORCID ProfileElise Kaplan, and Vassilis Koronakis
PNAS November 21, 2017 114 (47) 12572-12577; first published November 6, 2017; https://doi.org/10.1073/pnas.1712153114
Allister Crow
aDepartment of Pathology, University of Cambridge, Cambridge CB2 1QP, United Kingdom
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Allister Crow
Nicholas P. Greene
aDepartment of Pathology, University of Cambridge, Cambridge CB2 1QP, United Kingdom
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Elise Kaplan
aDepartment of Pathology, University of Cambridge, Cambridge CB2 1QP, United Kingdom
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Elise Kaplan
Vassilis Koronakis
aDepartment of Pathology, University of Cambridge, Cambridge CB2 1QP, United Kingdom
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: vk103@cam.ac.uk
  1. Edited by Thomas J. Silhavy, Princeton University, Princeton, NJ, and approved October 10, 2017 (received for review July 10, 2017)

  • Article
  • Figures & SI
  • Info & Metrics
  • PDF
Loading

Article Figures & SI

Figures

  • Fig. 1.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig. 1.

    Crystal structure of AaMacB with bound ATP. (A) Overall structure of the MacB dimer. (B) Linear domain organization of the MacB polypeptide. (C) Topology of MacB. (D) Location of the two ATP molecules (yellow) clamped between the NBDs. (E) Detailed view of bound ATP with omit map density contoured at 3.5 sigma (teal). Residues interacting with ATP are labeled and potential hydrogen bonds (dashed yellow lines) are indicated. Coloring is consistent across the figure: one monomer is shown in gray and the second is colored according to the domain arrangement.

  • Fig. 2.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig. 2.

    Functional analysis of E. coli MacAB-TolC in vivo. (A) Antibiotic susceptibility comparison between E. coli C43 (DE3) ΔacrABΔmacAB cells expressing E. coli MacA and either wild-type or Glu170Gln E. coli MacB variant. The ratio of the MIC for the wild-type MacB to the Glu170Gln variant is shown graphically for ethidium bromide (EBR), chlorhexidine (CHX), SDS, gentamycin (GEN), tetracycline (TET), ciprofloxacin (CIP), chloramphenicol (CHL), kanamycin (KAN), colistin (COL), bacitracin (BAC), and erythromycin (ERY). Structures of erythromycin, bacitracin, and colistin are shown (Inset). (B) Structure of enterotoxin STII with disulfide bond-forming sulfur atoms (yellow spheres; Protein Data Bank: 1EHS) (32). (C) Detection of secreted enterotoxin in E. coli culture supernatants by SDS/PAGE. Lanes from left to right: C43 wild-type, C43ΔmacAB, C43ΔmacAB expressing plasmid-borne macA (A), macB (B), macAB (AB), or macAB with an ATPase inactivating Glu170Gln substitution (EQ). All strains contain a plasmid-expressing enterotoxin STII. (D) Model for two-step secretion of enterotoxin STII across the E. coli cell envelope. Sec and Dsb represent the general protein secretion machinery and disulfide bond incorporation systems, respectively.

  • Fig. 3.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig. 3.

    Structure-based mutational analysis of E. coli MacB. Erythromycin resistance of C43 (DE3) ΔacrAB ΔmacAB cells expressing E. coli MacA and variant MacB mapped to a model of one monomer of E. coli MacB. Key indicates the fold decrease in MIC relative to cells expressing wild-type MacAB. (A) The MacB monomer presenting the dimer interface. (B) Close-up view of the periplasmic domain. (C) Top-down view of the MacB periplasmic domain. (D) MICs (µg/mL) for the 70 MacB variants tested. Homology model shown is based on our full-length AaMacB crystal structure and high-resolution structure of the E. coli MacB periplasmic domain.

  • Fig. 4.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig. 4.

    Mechanotransmission mechanism of MacB. (A) Nucleotide-free (Left) and ATP-bound MacB (Right). (B) Top-down view of the MacB dimer showing the open head of the nucleotide-free form. (C) Equivalent view of the ATP-bound form showing closure of the periplasmic dimer. Domains of MacB colored as in Fig. 1. Both models represent E. coli MacB; the nucleotide-free form is extracted from the cryoEM structure of the MacAB-TolC complex (5NIL), and the ATP-bound form is a homology model generated from our crystal structure of the nucleotide-bound AaMacB (5LIL). A full molecular morph between the two states is presented in Movie S3.

  • Fig. 5.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig. 5.

    A molecular bellows mechanism for substrate secretion by the MacAB-TolC tripartite efflux pump. (A) Proposed catalytic cycle of the MacAB-TolC efflux pump. MacB (red), MacA (purple), TolC (green) and substrate (blue). (B) Operation of a fireplace bellows.

  • Fig. 6.
    • Download figure
    • Open in new tab
    • Download powerpoint
    Fig. 6.

    MacB is the archetypal member of a topological unique ABC superfamily. (A) Hydropathy profile of MacB and five key homologs demonstrating a common four-transmembrane helix topology. Horizontal bars above the plots indicate TM helices. (B) Comparison of secondary structure predictions for the periplasmic domain located between TM1 and TM2 for MacB and homologs. Beta sheets (blue), alpha helices (red), and alignment gaps (gray) are shown. (C) Periplasmic domain structures of MacB, LolC, and FtsX. Sabre subdomain shown in purple, Porter subdomain cyan. (D) Superposition of Sabre subdomains from MacB and LolC. (E) Superposition of Porter subdomains from MacB, LolC, and FtsX.

Data supplements

  • Supporting Information

    • Download Supporting Information (PDF)
    • Download Appendix (PDF)
    • Download Movie_S01 (MOV) - Roving camera tour of the full-length MacB structure showing representative electron density. Electron density shown is a standard 2mFo-Fc map contoured at 1.25 sigma.
    • Download Movie_S02 (MOV) - Rocking camera shot showing a bound ATP molecule sandwiched between the MacB NBDs. Omit map density is shown as a teal mesh contoured at 3.5 sigma.
    • Download Movie_S03 (MOV) - Molecular morph between nucleotide-free and ATP-bound forms of MacB. (A) Side-on view of the MacB morph. MacB is colored as per scheme in Fig. 1. (B) Orthogonal side-on view. (C) Top-down view. (D) Top-down view of the MacB dimer shown as a surface colored according to the MIC experiments in Fig. 3.
    • Download Movie_S04 (MOV) - Structural alignments of the periplasmic Porter and Sabre subdomains for MacB superfamily members. (A) Sabre subdomains of E. coli MacB (purple) and LolC (slate blue). (B) Porter subdomains of MacB (cyan), LolC (dark blue), and FtsX (pale blue).
PreviousNext
Back to top
Article Alerts
Email Article

Thank you for your interest in spreading the word on PNAS.

NOTE: We only request your email address so that the person you are recommending the page to knows that you wanted them to see it, and that it is not junk mail. We do not capture any email address.

Enter multiple addresses on separate lines or separate them with commas.
Structure and mechanotransmission mechanism of the MacB ABC transporter superfamily
(Your Name) has sent you a message from PNAS
(Your Name) thought you would like to see the PNAS web site.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Citation Tools
Mechanotransmission mechanism of MacB
Allister Crow, Nicholas P. Greene, Elise Kaplan, Vassilis Koronakis
Proceedings of the National Academy of Sciences Nov 2017, 114 (47) 12572-12577; DOI: 10.1073/pnas.1712153114

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
Request Permissions
Share
Mechanotransmission mechanism of MacB
Allister Crow, Nicholas P. Greene, Elise Kaplan, Vassilis Koronakis
Proceedings of the National Academy of Sciences Nov 2017, 114 (47) 12572-12577; DOI: 10.1073/pnas.1712153114
Digg logo Reddit logo Twitter logo Facebook logo Google logo Mendeley logo
  • Tweet Widget
  • Facebook Like
  • Mendeley logo Mendeley
Proceedings of the National Academy of Sciences: 114 (47)
Table of Contents

Submit

Sign up for Article Alerts

Article Classifications

  • Biological Sciences
  • Microbiology

Jump to section

  • Article
    • Abstract
    • Results
    • Discussion
    • Methods
    • Acknowledgments
    • Footnotes
    • References
  • Figures & SI
  • Info & Metrics
  • PDF

You May Also be Interested in

Surgeons hands during surgery
Inner Workings: Advances in infectious disease treatment promise to expand the pool of donor organs
Despite myriad challenges, clinicians see room for progress.
Image credit: Shutterstock/David Tadevosian.
Setting sun over a sun-baked dirt landscape
Core Concept: Popular integrated assessment climate policy models have key caveats
Better explicating the strengths and shortcomings of these models will help refine projections and improve transparency in the years ahead.
Image credit: Witsawat.S.
Double helix
Journal Club: Noncoding DNA shown to underlie function, cause limb malformations
Using CRISPR, researchers showed that a region some used to label “junk DNA” has a major role in a rare genetic disorder.
Image credit: Nathan Devery.
Steamboat Geyser eruption.
Eruption of Steamboat Geyser
Mara Reed and Michael Manga explore why Yellowstone's Steamboat Geyser resumed erupting in 2018.
Listen
Past PodcastsSubscribe
Multi-color molecular model
Enzymatic breakdown of PET plastic
A study demonstrates how two enzymes—MHETase and PETase—work synergistically to depolymerize the plastic pollutant PET.
Image credit: Aaron McGeehan (artist).

Similar Articles

Site Logo
Powered by HighWire
  • Submit Manuscript
  • Twitter
  • Facebook
  • RSS Feeds
  • Email Alerts

Articles

  • Current Issue
  • Special Feature Articles – Most Recent
  • List of Issues

PNAS Portals

  • Anthropology
  • Chemistry
  • Classics
  • Front Matter
  • Physics
  • Sustainability Science
  • Teaching Resources

Information

  • Authors
  • Editorial Board
  • Reviewers
  • Librarians
  • Press
  • Site Map
  • PNAS Updates

Feedback    Privacy/Legal

Copyright © 2021 National Academy of Sciences. Online ISSN 1091-6490