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Research Article

A natural product inhibits the initiation of α-synuclein aggregation and suppresses its toxicity

Michele Perni, View ORCID ProfileCéline Galvagnion, Alexander Maltsev, View ORCID ProfileGeorg Meisl, Martin B. D. Müller, Pavan K. Challa, Julius B. Kirkegaard, View ORCID ProfilePatrick Flagmeier, Samuel I. A. Cohen, Roberta Cascella, Serene W. Chen, Ryan Limbocker, Pietro Sormanni, Gabriella T. Heller, Francesco A. Aprile, Nunilo Cremades, Cristina Cecchi, Fabrizio Chiti, Ellen A. A. Nollen, Tuomas P. J. Knowles, Michele Vendruscolo, Adriaan Bax, Michael Zasloff, and Christopher M. Dobson
  1. aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
  2. bUniversity Medical Centre Groningen, European Research Institute for the Biology of Aging, University of Groningen, Groningen 9713 AV, The Netherlands;
  3. cLaboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892;
  4. dDepartment of Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge CB3 0WA, United Kingdom;
  5. eDepartment of Experimental and Clinical Biomedical Sciences, University of Florence, Florence 50134, Italy;
  6. fBiocomputation and Complex Systems Physics Institute (BIFI)-Joint Unit BIFI-IQFR (CSIC), University of Zaragoza, 50018 Zaragoza, Spain;
  7. gMedStar–Georgetown Transplant Institute, Georgetown University School of Medicine, Washington, DC 20010

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PNAS February 7, 2017 114 (6) E1009-E1017; first published January 17, 2017; https://doi.org/10.1073/pnas.1610586114
Michele Perni
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
bUniversity Medical Centre Groningen, European Research Institute for the Biology of Aging, University of Groningen, Groningen 9713 AV, The Netherlands;
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Céline Galvagnion
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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  • ORCID record for Céline Galvagnion
Alexander Maltsev
cLaboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892;
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Georg Meisl
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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  • ORCID record for Georg Meisl
Martin B. D. Müller
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
bUniversity Medical Centre Groningen, European Research Institute for the Biology of Aging, University of Groningen, Groningen 9713 AV, The Netherlands;
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Pavan K. Challa
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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Julius B. Kirkegaard
dDepartment of Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge CB3 0WA, United Kingdom;
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Patrick Flagmeier
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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  • ORCID record for Patrick Flagmeier
Samuel I. A. Cohen
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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Roberta Cascella
eDepartment of Experimental and Clinical Biomedical Sciences, University of Florence, Florence 50134, Italy;
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Serene W. Chen
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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Ryan Limbocker
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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Pietro Sormanni
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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Gabriella T. Heller
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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Francesco A. Aprile
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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Nunilo Cremades
fBiocomputation and Complex Systems Physics Institute (BIFI)-Joint Unit BIFI-IQFR (CSIC), University of Zaragoza, 50018 Zaragoza, Spain;
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Cristina Cecchi
eDepartment of Experimental and Clinical Biomedical Sciences, University of Florence, Florence 50134, Italy;
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Fabrizio Chiti
eDepartment of Experimental and Clinical Biomedical Sciences, University of Florence, Florence 50134, Italy;
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Ellen A. A. Nollen
bUniversity Medical Centre Groningen, European Research Institute for the Biology of Aging, University of Groningen, Groningen 9713 AV, The Netherlands;
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Tuomas P. J. Knowles
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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Michele Vendruscolo
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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  • For correspondence: mv245@cam.ac.uk bax@nih.gov maz5@georgetown.edu cmd44@cam.ac.uk
Adriaan Bax
cLaboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892;
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  • For correspondence: mv245@cam.ac.uk bax@nih.gov maz5@georgetown.edu cmd44@cam.ac.uk
Michael Zasloff
gMedStar–Georgetown Transplant Institute, Georgetown University School of Medicine, Washington, DC 20010
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  • For correspondence: mv245@cam.ac.uk bax@nih.gov maz5@georgetown.edu cmd44@cam.ac.uk
Christopher M. Dobson
aDepartment of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom;
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  • For correspondence: mv245@cam.ac.uk bax@nih.gov maz5@georgetown.edu cmd44@cam.ac.uk
  1. Edited by Gregory A. Petsko, Weill Cornell Medical College, New York, NY, and approved December 5, 2016 (received for review June 29, 2016)

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Significance

Parkinson’s disease is characterized by the presence in brain tissues of aberrant aggregates primarily formed by the protein α-synuclein. It has been difficult, however, to identify compounds capable of preventing the formation of such deposits because of the complexity of the aggregation process of α-synuclein. By exploiting recently developed highly quantitative in vitro assays, we identify a compound, squalamine, that blocks α-synuclein aggregation, and characterize its mode of action. Our results show that squalamine, by competing with α-synuclein for binding lipid membranes, specifically inhibits the initiation of the aggregation process of α-synuclein and abolishes the toxicity of α-synuclein oligomers in neuronal cells and in an animal model of Parkinson’s disease.

Abstract

The self-assembly of α-synuclein is closely associated with Parkinson’s disease and related syndromes. We show that squalamine, a natural product with known anticancer and antiviral activity, dramatically affects α-synuclein aggregation in vitro and in vivo. We elucidate the mechanism of action of squalamine by investigating its interaction with lipid vesicles, which are known to stimulate nucleation, and find that this compound displaces α-synuclein from the surfaces of such vesicles, thereby blocking the first steps in its aggregation process. We also show that squalamine almost completely suppresses the toxicity of α-synuclein oligomers in human neuroblastoma cells by inhibiting their interactions with lipid membranes. We further examine the effects of squalamine in a Caenorhabditis elegans strain overexpressing α-synuclein, observing a dramatic reduction of α-synuclein aggregation and an almost complete elimination of muscle paralysis. These findings suggest that squalamine could be a means of therapeutic intervention in Parkinson’s disease and related conditions.

  • Parkinson’s disease
  • protein aggregation
  • amyloid formation
  • toxic oligomers
  • drug development

Footnotes

  • ↵1Present address: German Center for Neurodegenerative Diseases (DZNE), 53127 Bonn, Germany, and Institute of Physical Biology, Heinrich Heine Universität, Universitätsstr.1, 40225 Duesseldorf, Germany.

  • ↵2To whom correspondence may be addressed. Email: mv245{at}cam.ac.uk, bax{at}nih.gov, maz5{at}georgetown.edu, or cmd44{at}cam.ac.uk.
  • Author contributions: M.P., E.A.A.N., T.P.J.K., M.V., A.B., M.Z., and C.M.D. designed research; M.P., C.G., A.M., G.M., M.B.D.M., P.K.C., J.B.K., P.F., R.C., R.L., P.S., G.T.H., F.A.A., C.C., F.C., T.P.J.K., A.B., and M.Z. performed research; P.K.C., S.W.C., N.C., and E.A.A.N. contributed new reagents/analytic tools; M.P., C.G., A.M., G.M., P.K.C., J.B.K., P.F., S.I.A.C., R.C., R.L., P.S., C.C., F.C., E.A.A.N., T.P.J.K., A.B., M.Z., and C.M.D. analyzed data; and M.P., T.P.J.K., M.V., A.B., M.Z., and C.M.D. wrote the paper.

  • Conflict of interest statement: M.Z. is the inventor on a patent application that has been filed related to the compound described in this paper. The other authors declare no conflict of interest.

  • This article is a PNAS Direct Submission.

  • See Commentary on page 1223.

  • This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1610586114/-/DCSupplemental.

Freely available online through the PNAS open access option.

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A natural product inhibits α-synuclein aggregation
Michele Perni, Céline Galvagnion, Alexander Maltsev, Georg Meisl, Martin B. D. Müller, Pavan K. Challa, Julius B. Kirkegaard, Patrick Flagmeier, Samuel I. A. Cohen, Roberta Cascella, Serene W. Chen, Ryan Limbocker, Pietro Sormanni, Gabriella T. Heller, Francesco A. Aprile, Nunilo Cremades, Cristina Cecchi, Fabrizio Chiti, Ellen A. A. Nollen, Tuomas P. J. Knowles, Michele Vendruscolo, Adriaan Bax, Michael Zasloff, Christopher M. Dobson
Proceedings of the National Academy of Sciences Feb 2017, 114 (6) E1009-E1017; DOI: 10.1073/pnas.1610586114

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A natural product inhibits α-synuclein aggregation
Michele Perni, Céline Galvagnion, Alexander Maltsev, Georg Meisl, Martin B. D. Müller, Pavan K. Challa, Julius B. Kirkegaard, Patrick Flagmeier, Samuel I. A. Cohen, Roberta Cascella, Serene W. Chen, Ryan Limbocker, Pietro Sormanni, Gabriella T. Heller, Francesco A. Aprile, Nunilo Cremades, Cristina Cecchi, Fabrizio Chiti, Ellen A. A. Nollen, Tuomas P. J. Knowles, Michele Vendruscolo, Adriaan Bax, Michael Zasloff, Christopher M. Dobson
Proceedings of the National Academy of Sciences Feb 2017, 114 (6) E1009-E1017; DOI: 10.1073/pnas.1610586114
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Proceedings of the National Academy of Sciences: 114 (6)
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