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Research Article

Single-molecule excitation–emission spectroscopy

Erling Thyrhaug, View ORCID ProfileStefan Krause, View ORCID ProfileAntonio Perri, Giulio Cerullo, Dario Polli, Tom Vosch, and View ORCID ProfileJürgen Hauer
  1. aDynamical Spectroscopy, Department of Chemistry, Technical University of Munich, 85748 Garching, Germany;
  2. bDepartment of Chemistry, University of Copenhagen, 2100 Copenhagen, Denmark;
  3. cDipartimento di Fisica, Politecnico di Milano, 20133 Milano, Italy;
  4. dIstituto di Fotonica e Nanotecnologie, Consiglio Nazionale delle Ricerche, 20133 Milano, Italy;
  5. eCenter for Nano Science and Technology@PoliMi, Istituto Italiano di Tecnologia, 20133 Milano, Italy;
  6. fPhotonics Institute, TU Wien, 1040 Vienna, Austria

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PNAS March 5, 2019 116 (10) 4064-4069; first published February 15, 2019; https://doi.org/10.1073/pnas.1808290116
Erling Thyrhaug
aDynamical Spectroscopy, Department of Chemistry, Technical University of Munich, 85748 Garching, Germany;
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Stefan Krause
bDepartment of Chemistry, University of Copenhagen, 2100 Copenhagen, Denmark;
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  • ORCID record for Stefan Krause
Antonio Perri
cDipartimento di Fisica, Politecnico di Milano, 20133 Milano, Italy;
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  • ORCID record for Antonio Perri
Giulio Cerullo
cDipartimento di Fisica, Politecnico di Milano, 20133 Milano, Italy;
dIstituto di Fotonica e Nanotecnologie, Consiglio Nazionale delle Ricerche, 20133 Milano, Italy;
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Dario Polli
cDipartimento di Fisica, Politecnico di Milano, 20133 Milano, Italy;
eCenter for Nano Science and Technology@PoliMi, Istituto Italiano di Tecnologia, 20133 Milano, Italy;
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Tom Vosch
bDepartment of Chemistry, University of Copenhagen, 2100 Copenhagen, Denmark;
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Jürgen Hauer
aDynamical Spectroscopy, Department of Chemistry, Technical University of Munich, 85748 Garching, Germany;
fPhotonics Institute, TU Wien, 1040 Vienna, Austria
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  • ORCID record for Jürgen Hauer
  • For correspondence: juergen.hauer@tum.de
  1. Edited by Shaul Mukamel, University of California, Irvine, CA, and approved January 17, 2019 (received for review May 14, 2018)

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Significance

The most popular methods of single-molecule detection are based on fixed-wavelength excitation of individual molecules combined with dispersed detection of emission. While these methods are well established, they mainly provide information on the excited-state environment of the fluorophore. Here, we introduce an approach capable of simultaneously acquiring the full information, involving both ground- and excited states, by recording a 2D excitation versus emission map for single molecules by use of a birefringent interferometer. We interpret the results in terms of optical lineshape theory. The presented approach is easily implementable and applicable to a wide range of scientific problems, ranging from spectroscopy of supramolecular biological complexes to materials science.

Abstract

Single-molecule spectroscopy (SMS) provides a detailed view of individual emitter properties and local environments without having to resort to ensemble averaging. While the last several decades have seen substantial refinement of SMS techniques, recording excitation spectra of single emitters still poses a significant challenge. Here we address this problem by demonstrating simultaneous collection of fluorescence emission and excitation spectra using a compact common-path interferometer and broadband excitation, which is implemented as an extension of a standard SMS microscope. We demonstrate the technique by simultaneously collecting room-temperature excitation and emission spectra of individual terrylene diimide molecules and donor–acceptor dyads embedded in polystyrene. We analyze the resulting spectral parameters in terms of optical lineshape theory to obtain detailed information on the interactions of the emitters with their nanoscopic environment. This analysis finally reveals that environmental fluctuations between the donor and acceptor in the dyads are not correlated.

  • single molecule
  • fluorescence
  • spectroscopy
  • energy transfer
  • correlations

Footnotes

  • ↵1To whom correspondence should be addressed. Email: juergen.hauer{at}tum.de.
  • Author contributions: E.T., G.C., D.P., T.V., and J.H. designed research; E.T., S.K., and A.P. performed research; E.T., S.K., and A.P. analyzed data; and E.T. wrote the paper.

  • Conflict of interest statement: A.P., G.C., and D.P. disclose financial association with the company NIREOS (www.nireos.com), which manufactures the TWINS interferometer used in this paper.

  • This article is a PNAS Direct Submission.

  • This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1808290116/-/DCSupplemental.

Published under the PNAS license.

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Single-molecule excitation–emission spectroscopy
Erling Thyrhaug, Stefan Krause, Antonio Perri, Giulio Cerullo, Dario Polli, Tom Vosch, Jürgen Hauer
Proceedings of the National Academy of Sciences Mar 2019, 116 (10) 4064-4069; DOI: 10.1073/pnas.1808290116

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Single-molecule excitation–emission spectroscopy
Erling Thyrhaug, Stefan Krause, Antonio Perri, Giulio Cerullo, Dario Polli, Tom Vosch, Jürgen Hauer
Proceedings of the National Academy of Sciences Mar 2019, 116 (10) 4064-4069; DOI: 10.1073/pnas.1808290116
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Proceedings of the National Academy of Sciences: 116 (10)
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