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Reply

Reply to Heck et al.: Signal amplification at the rhodopsin-to-transducin·phosphodiesterase step in rod phototransduction

K.-W. Yau, W. W. S. Yue, and D. Silverman
PNAS April 30, 2019 116 (18) 8655-8656; first published April 30, 2019; https://doi.org/10.1073/pnas.1904339116
K.-W. Yau
aSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205;
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  • For correspondence: kwyau@jhmi.edu
W. W. S. Yue
bDepartment of Physiology, University of California, San Francisco, CA 94158
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D. Silverman
aSolomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205;
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This article has a Letter. Please see:

  • Phototransduction gain at the G-protein, transducin, and effector protein, phosphodiesterase-6, stages in retinal rods - April 30, 2019

See related content:

  • Elementary response triggered by transducin in retinal rods
    - Feb 22, 2019
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In PNAS (1), we estimate ∼12–14 active transducin·phosphodiesterase complexes (GT*·PDE*s) produced per active rhodopsin (Rho*) in mouse rods. This is the effective gain—more informative by not including the empty gain from GT*s failing to activate PDE. Nearly all previous estimates were on the total number of GT* produced per Rho* merely because no one before us could measure the individual GT*·PDE*-triggered electrical event for direct comparison with the single-Rho* response.

We do not state in our paper that previous measurements of the rate of GT* production per Rho* were all incorrect, but rather they spanned a wide range of values with no consensus regarding which value is valid, owing to the different experimental preparations, methodologies, temperature, interpretations, etc. [see SI appendix in our paper (1)]. Most importantly, unlike previous work, we obtained our data exclusively from intact, live rods, and thus our results are more straightforward to interpret. Heck et al.’s Letter (2) selects without justification particular values from a wide range to claim agreement with ours and fails to recognize the significance of our findings in the broader history of the problem.

Regarding specific point i in Heck et al.’s Letter, the authors again selectively discuss just one model [namely, their own (3, 4)] out of several about functional symmetry/asymmetry of PDE. This model is neither recent (see ref. 5) nor widely accepted in the field currently because of limited experimental evidence. Our paper provides an unbiased discussion of this and other models.

In point iia, Heck et al. question our analysis of the data in figure 3A, right (1), pointing out the disparity in waveform between the ensemble variance and the ensemble mean square of the flash responses. We do not completely disagree about possibly some small disparity between the two waveforms, but these measurements were difficult, given the small variance (10 times smaller than that in WT experiments). Moreover, instead of stemming necessarily from variability in the underlying elementary events as Heck et al. suggest, the discrepancy may come from variability in the timing of activation of individual GT molecules by REY-Rho* due to the much reduced affinity between REY-Rho* and GT.

Point iib questions a constancy of the GT*·PDE*-triggered events produced by apo-opsin (Opn*), proposing instead a stochastic variability in event size/waveform, but admits that it is not straightforward to take this into account in the analysis. Given no a priori evidence for stochastic variations, we extracted the average event size and shape by adopting the simplest model of fairly constant events. This possibility is not unfounded but guided by our previous findings on olfactory transduction (6), where the response to Golf*⋅AC*(adenylyl cyclase)—functionally equivalent to GT*⋅PDE* in vision—appears quite constant in amplitude and waveform. Furthermore, the time-integrated single-GT*⋅PDE*–triggered responses from our two independent methods match each other well (figure 7B in ref. 1).

In sum, relative to the “historical,” textbook-dogma value of 500 (7), we do consider our value very low and would still consider it low even if our estimate were, say, higher by another factor of 2.

Footnotes

  • ↵1To whom correspondence should be addressed. Email: kwyau{at}jhmi.edu.
  • Author contributions: K.-W.Y., W.Y., and D.S. designed research; W.Y. and D.S. performed research; W.Y. and D.S. analyzed data; and K.-W.Y., W.Y., and D.S. wrote the paper.

  • The authors declare no conflict of interest.

Published under the PNAS license.

References

  1. ↵
    1. Yue WWS, et al.
    (2019) Elementary response triggered by transducin in retinal rods. Proc Natl Acad Sci USA 116:5144–5153.
    OpenUrlAbstract/FREE Full Text
  2. ↵
    1. Heck M,
    2. Hofmann KP,
    3. Kraft TW,
    4. Lamb TD
    (2019) Phototransduction gain at the G-protein, transducin, and effector protein, phosphodiesterase-6, stages in retinal rods. Proc Natl Acad Sci USA 116:8653–8654.
    OpenUrlFREE Full Text
  3. ↵
    1. Lamb TD,
    2. Heck M,
    3. Kraft TW
    (2018) Implications of dimeric activation of PDE6 for rod phototransduction. Open Biol 8:180076.
    OpenUrlCrossRefPubMed
  4. ↵
    1. Qureshi BM, et al.
    (2018) It takes two transducins to activate the cGMP-phosphodiesterase 6 in retinal rods. Open Biol 8:180075.
    OpenUrlCrossRefPubMed
  5. ↵
    1. Bennett N,
    2. Clerc A
    (1989) Activation of cGMP phosphodiesterase in retinal rods: mechanism of interaction with the GTP-binding protein (transducin). Biochemistry 28:7418–7424.
    OpenUrlCrossRefPubMed
  6. ↵
    1. Bhandawat V,
    2. Reisert J,
    3. Yau K-W
    (2005) Elementary response of olfactory receptor neurons to odorants. Science 308:1931–1934.
    OpenUrlAbstract/FREE Full Text
  7. ↵
    1. Vuong TM,
    2. Chabre M,
    3. Stryer L
    (1984) Millisecond activation of transducin in the cyclic nucleotide cascade of vision. Nature 311:659–661.
    OpenUrlCrossRefPubMed
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Reply to Heck et al.: Signal amplification at the rhodopsin-to-transducin·phosphodiesterase step in rod phototransduction
K.-W. Yau, W. W. S. Yue, D. Silverman
Proceedings of the National Academy of Sciences Apr 2019, 116 (18) 8655-8656; DOI: 10.1073/pnas.1904339116

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Reply to Heck et al.: Signal amplification at the rhodopsin-to-transducin·phosphodiesterase step in rod phototransduction
K.-W. Yau, W. W. S. Yue, D. Silverman
Proceedings of the National Academy of Sciences Apr 2019, 116 (18) 8655-8656; DOI: 10.1073/pnas.1904339116
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