Skip to main content

Main menu

  • Home
  • Articles
    • Current
    • Special Feature Articles - Most Recent
    • Special Features
    • Colloquia
    • Collected Articles
    • PNAS Classics
    • List of Issues
  • Front Matter
    • Front Matter Portal
    • Journal Club
  • News
    • For the Press
    • This Week In PNAS
    • PNAS in the News
  • Podcasts
  • Authors
    • Information for Authors
    • Editorial and Journal Policies
    • Submission Procedures
    • Fees and Licenses
  • Submit
  • Submit
  • About
    • Editorial Board
    • PNAS Staff
    • FAQ
    • Accessibility Statement
    • Rights and Permissions
    • Site Map
  • Contact
  • Journal Club
  • Subscribe
    • Subscription Rates
    • Subscriptions FAQ
    • Open Access
    • Recommend PNAS to Your Librarian

User menu

  • Log in
  • My Cart

Search

  • Advanced search
Home
Home
  • Log in
  • My Cart

Advanced Search

  • Home
  • Articles
    • Current
    • Special Feature Articles - Most Recent
    • Special Features
    • Colloquia
    • Collected Articles
    • PNAS Classics
    • List of Issues
  • Front Matter
    • Front Matter Portal
    • Journal Club
  • News
    • For the Press
    • This Week In PNAS
    • PNAS in the News
  • Podcasts
  • Authors
    • Information for Authors
    • Editorial and Journal Policies
    • Submission Procedures
    • Fees and Licenses
  • Submit
Research Article

DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes

Jonas Pfab, View ORCID ProfileNhut Minh Phan, and View ORCID ProfileDong Si
  1. aDivision of Computing and Software Systems, University of Washington Bothell, Bothell, WA 98011

See allHide authors and affiliations

PNAS January 12, 2021 118 (2) e2017525118; https://doi.org/10.1073/pnas.2017525118
Jonas Pfab
aDivision of Computing and Software Systems, University of Washington Bothell, Bothell, WA 98011
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Nhut Minh Phan
aDivision of Computing and Software Systems, University of Washington Bothell, Bothell, WA 98011
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Nhut Minh Phan
Dong Si
aDivision of Computing and Software Systems, University of Washington Bothell, Bothell, WA 98011
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Dong Si
  • For correspondence: dongsi@uw.edu
  1. Edited by Eva Nogales, University of California, Berkeley, CA, and approved December 1, 2020 (received for review August 18, 2020)

  • Article
  • Figures & SI
  • Info & Metrics
  • PDF
Loading

Online Impact

 

Article Information

vol. 118 no. 2 e2017525118
DOI: 
https://doi.org/10.1073/pnas.2017525118
PubMed: 
33361332

Published By: 
National Academy of Sciences
Print ISSN: 
0027-8424
Online ISSN: 
1091-6490
History: 
  • Published in issue January 12, 2021.
  • Published online December 23, 2020.

Copyright & Usage: 
Copyright © 2021 the Author(s). Published by PNAS. This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY).

Author Information

  1. Jonas Pfaba,
  2. Nhut Minh Phana, and
  3. Dong Sia,1
  1. aDivision of Computing and Software Systems, University of Washington Bothell, Bothell, WA 98011
  1. Edited by Eva Nogales, University of California, Berkeley, CA, and approved December 1, 2020 (received for review August 18, 2020)

Footnotes

  • ↵1To whom correspondence may be addressed. Email: dongsi{at}uw.edu.
  • Author contributions: D.S. designed research; J.P., N.M.P., and D.S. performed research; J.P., N.M.P., and D.S. contributed new reagents/analytic tools; J.P., N.M.P., and D.S. analyzed data; and J.P., N.M.P., and D.S. wrote the paper.

  • The authors declare no competing interest.

  • This article is a PNAS Direct Submission.

  • This article contains supporting information online at https://www.pnas.org/lookup/suppl/doi:10.1073/pnas.2017525118/-/DCSupplemental.

Cited By...

  • Citations
  • Google Scholar

This article has not yet been cited by articles in journals that are participating in Crossref Cited-by Linking.

Article usage

Article usage: December 2020 to April 2021

AbstractFullPdf
Dec 2020699712153
Total 2020699712153
Jan 202115931501435
Feb 202158478130
Mar 202139514141
Apr 202110947106
Total 202117003440812
Total23994152965
PreviousNext
Back to top
Article Alerts
Email Article

Thank you for your interest in spreading the word on PNAS.

NOTE: We only request your email address so that the person you are recommending the page to knows that you wanted them to see it, and that it is not junk mail. We do not capture any email address.

Enter multiple addresses on separate lines or separate them with commas.
DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes
(Your Name) has sent you a message from PNAS
(Your Name) thought you would like to see the PNAS web site.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Citation Tools
DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes
Jonas Pfab, Nhut Minh Phan, Dong Si
Proceedings of the National Academy of Sciences Jan 2021, 118 (2) e2017525118; DOI: 10.1073/pnas.2017525118

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
Request Permissions
Share
DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes
Jonas Pfab, Nhut Minh Phan, Dong Si
Proceedings of the National Academy of Sciences Jan 2021, 118 (2) e2017525118; DOI: 10.1073/pnas.2017525118
del.icio.us logo Digg logo Reddit logo Twitter logo CiteULike logo Facebook logo Google logo Mendeley logo
  • Tweet Widget
  • Facebook Like
  • Mendeley logo Mendeley

Article Classifications

  • Biological Sciences
  • Biophysics and Computational Biology
  • Physical Sciences
  • Biophysics and Computational Biology
Proceedings of the National Academy of Sciences: 118 (2)
Table of Contents

Submit

Sign up for Article Alerts

Jump to section

  • Article
    • Abstract
    • Methods
    • Results
    • Discussion
    • Data Availability.
    • Acknowledgments
    • Footnotes
    • References
  • Figures & SI
  • Info & Metrics
  • PDF

You May Also be Interested in

Smoke emanates from Japan’s Fukushima nuclear power plant a few days after tsunami damage
Core Concept: Muography offers a new way to see inside a multitude of objects
Muons penetrate much further than X-rays, they do essentially zero damage, and they are provided for free by the cosmos.
Image credit: Science Source/Digital Globe.
Water from a faucet fills a glass.
News Feature: How “forever chemicals” might impair the immune system
Researchers are exploring whether these ubiquitous fluorinated molecules might worsen infections or hamper vaccine effectiveness.
Image credit: Shutterstock/Dmitry Naumov.
Venus flytrap captures a fly.
Journal Club: Venus flytrap mechanism could shed light on how plants sense touch
One protein seems to play a key role in touch sensitivity for flytraps and other meat-eating plants.
Image credit: Shutterstock/Kuttelvaserova Stuchelova.
Illustration of groups of people chatting
Exploring the length of human conversations
Adam Mastroianni and Daniel Gilbert explore why conversations almost never end when people want them to.
Listen
Past PodcastsSubscribe
Horse fossil
Mounted horseback riding in ancient China
A study uncovers early evidence of equestrianism in ancient China.
Image credit: Jian Ma.

Similar Articles

Site Logo
Powered by HighWire
  • Submit Manuscript
  • Twitter
  • Facebook
  • RSS Feeds
  • Email Alerts

Articles

  • Current Issue
  • Special Feature Articles – Most Recent
  • List of Issues

PNAS Portals

  • Anthropology
  • Chemistry
  • Classics
  • Front Matter
  • Physics
  • Sustainability Science
  • Teaching Resources

Information

  • Authors
  • Editorial Board
  • Reviewers
  • Subscribers
  • Librarians
  • Press
  • Cozzarelli Prize
  • Site Map
  • PNAS Updates
  • FAQs
  • Accessibility Statement
  • Rights & Permissions
  • About
  • Contact

Feedback    Privacy/Legal

Copyright © 2021 National Academy of Sciences. Online ISSN 1091-6490