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Table of Contents

January 19, 2021; vol. 118 no. 3

This Week in PNAS

This week's research highlights
  • You have access
    In This Issue
    PNAS January 19, 2021 118 (3) eiti0221118; https://doi.org/10.1073/iti0321118

Opinion

Leading scientists discuss current issues
  • You have access
    Opinion: Standardizing gene product nomenclature—a call to action
    • Front Matter
    Kenji Fujiyoshi, Elspeth A. Bruford, Pawel Mroz, Cynthe L. Sims, Timothy J. O’Leary, Anthony W. I. Lo, Neng Chen, Nimesh R. Patel, Keyur Pravinchandra Patel, Barbara Seliger, Mingyang Song, Federico A. Monzon, Alexis B. Carter, Margaret L. Gulley, Susan M. Mockus, Thuy L. Phung, Harriet Feilotter, Heather E. Williams, and Shuji Ogino
    PNAS January 19, 2021 118 (3) e2025207118; https://doi.org/10.1073/pnas.2025207118

News Feature

An in-depth look at trending science issues
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    News Feature: Realizing the roads of the future
    • Front Matter
    Sid Perkins
    PNAS January 19, 2021 118 (3) e2024425118; https://doi.org/10.1073/pnas.2024425118

Profile

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    Profile of David M. Kingsley
    Beth Azar
    PNAS January 19, 2021 118 (3) e2025633118; https://doi.org/10.1073/pnas.2025633118

    See companion article:

    • Fitness maps to a large-effect locus in introduced stickleback populations
      - Jan 07, 2021
  • You have access
    Profile of Dolph Schluter
    Beth Azar
    PNAS January 19, 2021 118 (3) e2025630118; https://doi.org/10.1073/pnas.2025630118

    See companion article:

    • Fitness maps to a large-effect locus in introduced stickleback populations
      - Jan 07, 2021

Commentaries

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    A cancer in hybrids
    Chesley M. Johnson and Nitin Phadnis
    PNAS January 19, 2021 118 (3) e2023488118; https://doi.org/10.1073/pnas.2023488118

    See companion article:

    • Oncogenic allelic interaction in Xiphophorus highlights hybrid incompatibility
      - Nov 09, 2020
  • You have access
    Diversification spins a heatwave safety net for fisheries
    Malin L. Pinsky
    PNAS January 19, 2021 118 (3) e2024412118; https://doi.org/10.1073/pnas.2024412118

    See companion article:

    • Climate shock effects and mediation in fisheries
      - Jan 04, 2021

Perspective

  • Open Access
    Vaccinology in the post−COVID-19 era
    Rino Rappuoli, Ennio De Gregorio, Giuseppe Del Giudice, Sanjay Phogat, Simone Pecetta, Mariagrazia Pizza, and Emmanuel Hanon
    PNAS January 19, 2021 118 (3) e2020368118; https://doi.org/10.1073/pnas.2020368118

Letters

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    Who’s fooling whom in the science of magic?
    Geoff G. Cole
    PNAS January 19, 2021 118 (3) e2019540118; https://doi.org/10.1073/pnas.2019540118
  • You have access
    Reply to Cole: Magic and deception—do magicians mislead science?
    Alice Pailhès and Gustav Kuhn
    PNAS January 19, 2021 118 (3) e2022099118; https://doi.org/10.1073/pnas.2022099118

    See companion article:

    • Influencing choices with conversational primes: How a magic trick unconsciously influences card choices
      - Jul 13, 2020
  • You have access
    UVB stimulates production of enkephalins and other neuropeptides by skin-resident cells
    Andrzej T. Slominski, Radomir M. Slominski, and Chander Raman
    PNAS January 19, 2021 118 (3) e2020425118; https://doi.org/10.1073/pnas.2020425118
  • You have access
    Reply to Slominski et al.: UVB irradiation induces proenkephalin+ regulatory T cells with a wound-healing function
    Hiroaki Shime, Mizuyu Odanaka, Makoto Tsuiji, Takuma Matoba, Masaki Imai, Yoshiaki Yasumizu, Ryuta Uraki, Kiyoshi Minohara, Maiko Watanabe, Anthony John Bonito, Hidehiro Fukuyama, Naganari Ohkura, Shimon Sakaguchi, Akimichi Morita, and Sayuri Yamazaki
    PNAS January 19, 2021 118 (3) e2021919118; https://doi.org/10.1073/pnas.2021919118

    See companion article:

    • Proenkephalin+ regulatory T cells expanded by ultraviolet B exposure maintain skin homeostasis with a healing function
      - Aug 07, 2020
  • You have access
    Viruses from poultry and livestock pose continuous threats to human beings
    Si Chen, Liying Zhang, Lin Wang, Hongsheng Ouyang, and Linzhu Ren
    PNAS January 19, 2021 118 (3) e2022344118; https://doi.org/10.1073/pnas.2022344118

Brief Report

  • Open Access
    Effect of “finite pool of worry” and COVID-19 on UK climate change perceptions
    Darrick Evensen, Lorraine Whitmarsh, Phil Bartie, Patrick Devine-Wright, Jennifer Dickie, Adam Varley, Stacia Ryder, and Adam Mayer
    PNAS January 19, 2021 118 (3) e2018936118; https://doi.org/10.1073/pnas.2018936118

Physical Sciences

  • Applied Physical Sciences

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      X-ray linear dichroic ptychography
      Yuan Hung Lo, Jihan Zhou, Arjun Rana, Drew Morrill, Christian Gentry, Bjoern Enders, Young-Sang Yu, Chang-Yu Sun, David A. Shapiro, Roger W. Falcone, Henry C. Kapteyn, Margaret M. Murnane, Pupa U. P. A. Gilbert, and Jianwei Miao
      PNAS January 19, 2021 118 (3) e2019068118; https://doi.org/10.1073/pnas.2019068118
    • Open Access
      Avian mud nest architecture by self-secreted saliva
      Yeonsu Jung, Sohyun Jung, Sang-im Lee, Wonjung Kim, and Ho-Young Kim
      PNAS January 19, 2021 118 (3) e2018509118; https://doi.org/10.1073/pnas.2018509118
    • You have access
      Sculpting crystals one Burgers vector at a time: Toward colloidal lattice robot swarms
      Bryan VanSaders and Sharon C. Glotzer
      PNAS January 19, 2021 118 (3) e2017377118; https://doi.org/10.1073/pnas.2017377118
    • You have access
      Induced transparency by interference or polarization
      Changqing Wang, Xuefeng Jiang, William R. Sweeney, Chia Wei Hsu, Yiming Liu, Guangming Zhao, Bo Peng, Mengzhen Zhang, Liang Jiang, A. Douglas Stone, and Lan Yang
      PNAS January 19, 2021 118 (3) e2012982118; https://doi.org/10.1073/pnas.2012982118
    • You have access
      Topological metals and finite-momentum superconductors
      Noah F. Q. Yuan and Liang Fu
      PNAS January 19, 2021 118 (3) e2019063118; https://doi.org/10.1073/pnas.2019063118
    • You have access
      Time-reversal symmetry breaking in the Fe-chalcogenide superconductors
      Nader Zaki, Genda Gu, Alexei Tsvelik, Congjun Wu, and Peter D. Johnson
      PNAS January 19, 2021 118 (3) e2007241118; https://doi.org/10.1073/pnas.2007241118
    • You have access
      Foraging trade-offs, flagellar arrangements, and flow architecture of planktonic protists
      Lasse Tor Nielsen and Thomas Kiørboe
      PNAS January 19, 2021 118 (3) e2009930118; https://doi.org/10.1073/pnas.2009930118
  • Chemistry

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      Imaging conical intersection dynamics during azobenzene photoisomerization by ultrafast X-ray diffraction
      Daniel Keefer, Flavia Aleotti, Jérémy R. Rouxel, Francesco Segatta, Bing Gu, Artur Nenov, Marco Garavelli, and Shaul Mukamel
      PNAS January 19, 2021 118 (3) e2022037118; https://doi.org/10.1073/pnas.2022037118
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      The 3-O-sulfation of heparan sulfate modulates protein binding and lyase degradation
      Pradeep Chopra, Apoorva Joshi, Jiandong Wu, Weigang Lu, Tejabhiram Yadavalli, Margreet A. Wolfert, Deepak Shukla, Joseph Zaia, and Geert-Jan Boons
      PNAS January 19, 2021 118 (3) e2012935118; https://doi.org/10.1073/pnas.2012935118
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      Thermodynamics of interfaces extended to nanoscales by introducing integral and differential surface tensions
      W. Dong
      PNAS January 19, 2021 118 (3) e2019873118; https://doi.org/10.1073/pnas.2019873118
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      Ferric heme as a CO/NO sensor in the nuclear receptor Rev-Erbß by coupling gas binding to electron transfer
      Anindita Sarkar, Eric L. Carter, Jill B. Harland, Amy L. Speelman, Nicolai Lehnert, and Stephen W. Ragsdale
      PNAS January 19, 2021 118 (3) e2016717118; https://doi.org/10.1073/pnas.2016717118
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      Stone–Wales defects preserve hyperuniformity in amorphous two-dimensional networks
      Duyu Chen, Yu Zheng, Lei Liu, Ge Zhang, Mohan Chen, Yang Jiao, and Houlong Zhuang
      PNAS January 19, 2021 118 (3) e2016862118; https://doi.org/10.1073/pnas.2016862118
    • You have access
      Modulation of immune cell reactivity with cis-binding Siglec agonists
      Corleone S. Delaveris, Shannon H. Chiu, Nicholas M. Riley, and Carolyn R. Bertozzi
      PNAS January 19, 2021 118 (3) e2012408118; https://doi.org/10.1073/pnas.2012408118
    • You have access
      Cellular autofluorescence is magnetic field sensitive
      Noboru Ikeya and Jonathan R. Woodward
      PNAS January 19, 2021 118 (3) e2018043118; https://doi.org/10.1073/pnas.2018043118
  • Computer Sciences

    • Open Access
      Unsupervised neural network models of the ventral visual stream
      Chengxu Zhuang, Siming Yan, Aran Nayebi, Martin Schrimpf, Michael C. Frank, James J. DiCarlo, and Daniel L. K. Yamins
      PNAS January 19, 2021 118 (3) e2014196118; https://doi.org/10.1073/pnas.2014196118
  • Earth, Atmospheric, and Planetary Sciences

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      Garnet sand reveals rock recycling processes in the youngest exhumed high- and ultrahigh-pressure terrane on Earth
      Suzanne L. Baldwin, Jan Schönig, Joseph P. Gonzalez, Hugh Davies, and Hilmar von Eynatten
      PNAS January 19, 2021 118 (3) e2017231118; https://doi.org/10.1073/pnas.2017231118
    • Open Access
      A modern scleractinian coral with a two-component calcite–aragonite skeleton
      Jarosław Stolarski, Ismael Coronado, Jack G. Murphy, Marcelo V. Kitahara, Katarzyna Janiszewska, Maciej Mazur, Anne M. Gothmann, Anne-Sophie Bouvier, Johanna Marin-Carbonne, Michelle L. Taylor, Andrea M. Quattrini, Catherine S. McFadden, John A. Higgins, Laura F. Robinson, and Anders Meibom
      PNAS January 19, 2021 118 (3) e2013316117; first published December 15, 2020. https://doi.org/10.1073/pnas.2013316117
  • Engineering

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      Photosynthesis-assisted remodeling of three-dimensional printed structures
      Kunhao Yu, Zhangzhengrong Feng, Haixu Du, An Xin, Kyung Hoon Lee, Ketian Li, Yipin Su, Qiming Wang, Nicholas X. Fang, and Chiara Daraio
      PNAS January 19, 2021 118 (3) e2016524118; https://doi.org/10.1073/pnas.2016524118
    • You have access
      High-speed compressed-sensing fluorescence lifetime imaging microscopy of live cells
      Yayao Ma, Youngjae Lee, Catherine Best-Popescu, and Liang Gao
      PNAS January 19, 2021 118 (3) e2004176118; https://doi.org/10.1073/pnas.2004176118
    • Open Access
      In silico dynamics of COVID-19 phenotypes for optimizing clinical management
      Chrysovalantis Voutouri, Mohammad Reza Nikmaneshi, C. Corey Hardin, Ankit B. Patel, Ashish Verma, Melin J. Khandekar, Sayon Dutta, Triantafyllos Stylianopoulos, Lance L. Munn, and Rakesh K. Jain
      PNAS January 19, 2021 118 (3) e2021642118; https://doi.org/10.1073/pnas.2021642118
    • Open Access
      Prediction of Alzheimer’s disease-specific phospholipase c gamma-1 SNV by deep learning-based approach for high-throughput screening
      Sung-Hyun Kim, Sumin Yang, Key-Hwan Lim, Euiseng Ko, Hyun-Jun Jang, Mingon Kang, Pann-Ghill Suh, and Jae-Yeol Joo
      PNAS January 19, 2021 118 (3) e2011250118; https://doi.org/10.1073/pnas.2011250118
  • Environmental Sciences

    • Open Access
      Bioavailable soil Pb minimized by in situ transformation to plumbojarosite
      Ranju R. Karna, Matt R. Noerpel, Clay Nelson, Brittany Elek, Karen Herbin-Davis, Gary Diamond, Karen Bradham, David J. Thomas, and Kirk G. Scheckel
      PNAS January 19, 2021 118 (3) e2020315117; first published December 21, 2020. https://doi.org/10.1073/pnas.2020315117
  • Physics

    • Open Access
      Observation of liquid glass in suspensions of ellipsoidal colloids
      Jörg Roller, Aleena Laganapan, Janne-Mieke Meijer, Matthias Fuchs, and Andreas Zumbusch
      PNAS January 19, 2021 118 (3) e2018072118; https://doi.org/10.1073/pnas.2018072118
    • You have access
      Emergence of homochirality in large molecular systems
      Gabin Laurent, David Lacoste, and Pierre Gaspard
      PNAS January 19, 2021 118 (3) e2012741118; https://doi.org/10.1073/pnas.2012741118

Social Sciences

  • Environmental Sciences

    • Open Access
      Satellites can reveal global extent of forced labor in the world’s fishing fleet
      • From the Cover
      Gavin G. McDonald, Christopher Costello, Jennifer Bone, Reniel B. Cabral, Valerie Farabee, Timothy Hochberg, David Kroodsma, Tracey Mangin, Kyle C. Meng, and Oliver Zahn
      PNAS January 19, 2021 118 (3) e2016238117; first published December 21, 2020. https://doi.org/10.1073/pnas.2016238117
  • Psychological and Cognitive Sciences

    • Open Access
      Childhood self-control forecasts the pace of midlife aging and preparedness for old age
      • From the Cover
      Leah S. Richmond-Rakerd, Avshalom Caspi, Antony Ambler, Tracy d’Arbeloff, Marieke de Bruine, Maxwell Elliott, HonaLee Harrington, Sean Hogan, Renate M. Houts, David Ireland, Ross Keenan, Annchen R. Knodt, Tracy R. Melzer, Sena Park, Richie Poulton, Sandhya Ramrakha, Line Jee Hartmann Rasmussen, Elizabeth Sack, Adam T. Schmidt, Maria L. Sison, Jasmin Wertz, Ahmad R. Hariri, and Terrie E. Moffitt
      PNAS January 19, 2021 118 (3) e2010211118; https://doi.org/10.1073/pnas.2010211118

Biological Sciences

  • Applied Biological Sciences

    • You have access
      High-speed compressed-sensing fluorescence lifetime imaging microscopy of live cells
      Yayao Ma, Youngjae Lee, Catherine Best-Popescu, and Liang Gao
      PNAS January 19, 2021 118 (3) e2004176118; https://doi.org/10.1073/pnas.2004176118
  • Biochemistry

    • You have access
      Modulation of immune cell reactivity with cis-binding Siglec agonists
      Corleone S. Delaveris, Shannon H. Chiu, Nicholas M. Riley, and Carolyn R. Bertozzi
      PNAS January 19, 2021 118 (3) e2012408118; https://doi.org/10.1073/pnas.2012408118
    • You have access
      ACTL6A promotes repair of cisplatin-induced DNA damage, a new mechanism of platinum resistance in cancer
      Yang Xiao, Fang-Tsyr Lin, and Weei-Chin Lin
      PNAS January 19, 2021 118 (3) e2015808118; https://doi.org/10.1073/pnas.2015808118
    • Open Access
      Citramalate synthase yields a biosynthetic pathway for isoleucine and straight- and branched-chain ester formation in ripening apple fruit
      Nobuko Sugimoto, Philip Engelgau, A. Daniel Jones, Jun Song, and Randolph Beaudry
      PNAS January 19, 2021 118 (3) e2009988118; https://doi.org/10.1073/pnas.2009988118
    • Open Access
      Small-molecule endoplasmic reticulum proteostasis regulator acts as a broad-spectrum inhibitor of dengue and Zika virus infections
      Katherine M. Almasy, Jonathan P. Davies, Samantha M. Lisy, Reyhaneh Tirgar, Sirena C. Tran, and Lars Plate
      PNAS January 19, 2021 118 (3) e2012209118; https://doi.org/10.1073/pnas.2012209118
    • You have access
      The amphibian antimicrobial peptide uperin 3.5 is a cross-α/cross-β chameleon functional amyloid
      Nir Salinas, Einav Tayeb-Fligelman, Massimo D. Sammito, Daniel Bloch, Raz Jelinek, Dror Noy, Isabel Usón, and Meytal Landau
      PNAS January 19, 2021 118 (3) e2014442118; https://doi.org/10.1073/pnas.2014442118
  • Biophysics and Computational Biology

    • You have access
      X-ray linear dichroic ptychography
      Yuan Hung Lo, Jihan Zhou, Arjun Rana, Drew Morrill, Christian Gentry, Bjoern Enders, Young-Sang Yu, Chang-Yu Sun, David A. Shapiro, Roger W. Falcone, Henry C. Kapteyn, Margaret M. Murnane, Pupa U. P. A. Gilbert, and Jianwei Miao
      PNAS January 19, 2021 118 (3) e2019068118; https://doi.org/10.1073/pnas.2019068118
    • Open Access
      Avian mud nest architecture by self-secreted saliva
      Yeonsu Jung, Sohyun Jung, Sang-im Lee, Wonjung Kim, and Ho-Young Kim
      PNAS January 19, 2021 118 (3) e2018509118; https://doi.org/10.1073/pnas.2018509118
    • Open Access
      Immature HIV-1 assembles from Gag dimers leaving partial hexamers at lattice edges as potential substrates for proteolytic maturation
      Aaron Tan, Alexander J. Pak, Dustin R. Morado, Gregory A. Voth, and John A. G. Briggs
      PNAS January 19, 2021 118 (3) e2020054118; https://doi.org/10.1073/pnas.2020054118
    • You have access
      Structure and activation mechanism of the yeast RNA Pol II CTD kinase CTDK-1 complex
      Yihu Xie, Christopher L. Lord, Bradley P. Clarke, Austin L. Ivey, Pate S. Hill, W. Hayes McDonald, Susan R. Wente, and Yi Ren
      PNAS January 19, 2021 118 (3) e2019163118; https://doi.org/10.1073/pnas.2019163118
  • Cell Biology

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      Cellular autofluorescence is magnetic field sensitive
      Noboru Ikeya and Jonathan R. Woodward
      PNAS January 19, 2021 118 (3) e2018043118; https://doi.org/10.1073/pnas.2018043118
    • You have access
      Interplay between desmoglein2 and hypoxia controls metastasis in breast cancer
      Po-Hao Chang, Min-Che Chen, Ya-Ping Tsai, Grace Y. T. Tan, Pang-Hung Hsu, Yung-Ming Jeng, Yi-Fang Tsai, Muh-Hwa Yang, and Wendy W. Hwang-Verslues
      PNAS January 19, 2021 118 (3) e2014408118; https://doi.org/10.1073/pnas.2014408118
    • Open Access
      ATRX and RECQ5 define distinct homologous recombination subpathways
      Amira Elbakry, Szilvia Juhász, Ki Choi Chan, and Markus Löbrich
      PNAS January 19, 2021 118 (3) e2010370118; https://doi.org/10.1073/pnas.2010370118
  • Developmental Biology

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      Placental trophoblast syncytialization potentiates macropinocytosis via mTOR signaling to adapt to reduced amino acid supply
      Xuan Shao, Guangming Cao, Dunjin Chen, Juan Liu, Bolan Yu, Ming Liu, Yu-Xia Li, Bin Cao, Yoel Sadovsky, and Yan-Ling Wang
      PNAS January 19, 2021 118 (3) e2017092118; https://doi.org/10.1073/pnas.2017092118
    • Open Access
      OCT4 induces embryonic pluripotency via STAT3 signaling and metabolic mechanisms
      Giuliano G. Stirparo, Agata Kurowski, Ayaka Yanagida, Lawrence E. Bates, Stanley E. Strawbridge, Siarhei Hladkou, Hannah T. Stuart, Thorsten E. Boroviak, Jose C. R. Silva, and Jennifer Nichols
      PNAS January 19, 2021 118 (3) e2008890118; https://doi.org/10.1073/pnas.2008890118
  • Ecology

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      Foraging trade-offs, flagellar arrangements, and flow architecture of planktonic protists
      Lasse Tor Nielsen and Thomas Kiørboe
      PNAS January 19, 2021 118 (3) e2009930118; https://doi.org/10.1073/pnas.2009930118
    • You have access
      The decline of mammal functional and evolutionary diversity worldwide
      • From the Cover
      Jedediah F. Brodie, Sara Williams, and Brittany Garner
      PNAS January 19, 2021 118 (3) e1921849118; https://doi.org/10.1073/pnas.1921849118
    • You have access
      Natural resistance to worms exacerbates bovine tuberculosis severity independently of worm coinfection
      Vanessa O. Ezenwa, Sarah A. Budischak, Peter Buss, Mauricio Seguel, Gordon Luikart, Anna E. Jolles, and Kaori Sakamoto
      PNAS January 19, 2021 118 (3) e2015080118; https://doi.org/10.1073/pnas.2015080118
    • You have access
      Spatial and evolutionary predictability of phytochemical diversity
      Emmanuel Defossez, Camille Pitteloud, Patrice Descombes, Gaétan Glauser, Pierre-Marie Allard, Tom W. N. Walker, Pilar Fernandez-Conradi, Jean-Luc Wolfender, Loïc Pellissier, and Sergio Rasmann
      PNAS January 19, 2021 118 (3) e2013344118; https://doi.org/10.1073/pnas.2013344118
    • You have access
      Shell mineralogy of a foundational marine species, Mytilus californianus, over half a century in a changing ocean
      Elizabeth M. Bullard, Ivan Torres, Tianqi Ren, Olivia A. Graeve, and Kaustuv Roy
      PNAS January 19, 2021 118 (3) e2004769118; https://doi.org/10.1073/pnas.2004769118
  • Environmental Sciences

    • Open Access
      Bioavailable soil Pb minimized by in situ transformation to plumbojarosite
      Ranju R. Karna, Matt R. Noerpel, Clay Nelson, Brittany Elek, Karen Herbin-Davis, Gary Diamond, Karen Bradham, David J. Thomas, and Kirk G. Scheckel
      PNAS January 19, 2021 118 (3) e2020315117; first published December 21, 2020. https://doi.org/10.1073/pnas.2020315117
    • Open Access
      Satellites can reveal global extent of forced labor in the world’s fishing fleet
      • From the Cover
      Gavin G. McDonald, Christopher Costello, Jennifer Bone, Reniel B. Cabral, Valerie Farabee, Timothy Hochberg, David Kroodsma, Tracey Mangin, Kyle C. Meng, and Oliver Zahn
      PNAS January 19, 2021 118 (3) e2016238117; first published December 21, 2020. https://doi.org/10.1073/pnas.2016238117
  • Evolution

    • You have access
      Fitness maps to a large-effect locus in introduced stickleback populations
      • Inaugural Article
      Dolph Schluter, Kerry B. Marchinko, Matthew E. Arnegard, Haili Zhang, Shannon D. Brady, Felicity C. Jones, Michael A. Bell, and David M. Kingsley
      PNAS January 19, 2021 118 (3) e1914889118; https://doi.org/10.1073/pnas.1914889118

      See companion article:

      • Profile of David M. Kingsley
        - Jan 11, 2021
      • Profile of Dolph Schluter
        - Jan 11, 2021
    • Open Access
      A modern scleractinian coral with a two-component calcite–aragonite skeleton
      Jarosław Stolarski, Ismael Coronado, Jack G. Murphy, Marcelo V. Kitahara, Katarzyna Janiszewska, Maciej Mazur, Anne M. Gothmann, Anne-Sophie Bouvier, Johanna Marin-Carbonne, Michelle L. Taylor, Andrea M. Quattrini, Catherine S. McFadden, John A. Higgins, Laura F. Robinson, and Anders Meibom
      PNAS January 19, 2021 118 (3) e2013316117; first published December 15, 2020. https://doi.org/10.1073/pnas.2013316117
    • You have access
      Negative selection on human genes underlying inborn errors depends on disease outcome and both the mode and mechanism of inheritance
      Franck Rapaport, Bertrand Boisson, Anne Gregor, Vivien Béziat, Stéphanie Boisson-Dupuis, Jacinta Bustamante, Emmanuelle Jouanguy, Anne Puel, Jérémie Rosain, Qian Zhang, Shen-Ying Zhang, Joseph G. Gleeson, Lluis Quintana-Murci, Jean-Laurent Casanova, Laurent Abel, and Etienne Patin
      PNAS January 19, 2021 118 (3) e2001248118; https://doi.org/10.1073/pnas.2001248118
    • You have access
      Diversification of mammalian deltaviruses by host shifting
      Laura M. Bergner, Richard J. Orton, Alice Broos, Carlos Tello, Daniel J. Becker, Jorge E. Carrera, Arvind H. Patel, Roman Biek, and Daniel G. Streicker
      PNAS January 19, 2021 118 (3) e2019907118; https://doi.org/10.1073/pnas.2019907118
    • Open Access
      The harsh microenvironment in early breast cancer selects for a Warburg phenotype
      Mehdi Damaghi, Jeffrey West, Mark Robertson-Tessi, Liping Xu, Meghan C. Ferrall-Fairbanks, Paul A. Stewart, Erez Persi, Brooke L. Fridley, Philipp M. Altrock, Robert A. Gatenby, Peter A. Sims, Alexander R. A. Anderson, and Robert J. Gillies
      PNAS January 19, 2021 118 (3) e2011342118; https://doi.org/10.1073/pnas.2011342118
  • Immunology and Inflammation

    • Open Access
      Physiological role of the 3′IgH CBEs super-anchor in antibody class switching
      • From the Cover
      Xuefei Zhang, Hye Suk Yoon, Aimee M. Chapdelaine-Williams, Nia Kyritsis, and Frederick W. Alt
      PNAS January 19, 2021 118 (3) e2024392118; https://doi.org/10.1073/pnas.2024392118

      See companion article:

      • An insulator that regulates chromatin extrusion and class switch recombination
        - Jan 21, 2021
    • Open Access
      Droplet-based mRNA sequencing of fixed and permeabilized cells by CLInt-seq allows for antigen-specific TCR cloning
      Pavlo A. Nesterenko, Jami McLaughlin, Donghui Cheng, Nathanael J. Bangayan, Giselle Burton Sojo, Christopher S. Seet, Yu Qin, Zhiyuan Mao, Matthew B. Obusan, John W. Phillips, and Owen N. Witte
      PNAS January 19, 2021 118 (3) e2021190118; https://doi.org/10.1073/pnas.2021190118
    • Open Access
      Natural cystatin C fragments inhibit GPR15-mediated HIV and SIV infection without interfering with GPR15L signaling
      Manuel Hayn, Andrea Blötz, Armando Rodríguez, Solange Vidal, Nico Preising, Ludger Ständker, Sebastian Wiese, Christina M. Stürzel, Mirja Harms, Rüdiger Gross, Christoph Jung, Miriam Kiene, Timo Jacob, Stefan Pöhlmann, Wolf-Georg Forssmann, Jan Münch, Konstantin M. J. Sparrer, Klaus Seuwen, Beatrice H. Hahn, and Frank Kirchhoff
      PNAS January 19, 2021 118 (3) e2023776118; https://doi.org/10.1073/pnas.2023776118
    • You have access
      An in vivo screen of noncoding loci reveals that Daedalus is a gatekeeper of an Ikaros-dependent checkpoint during haematopoiesis
      Christian C. D. Harman, Will Bailis, Jun Zhao, Louisa Hill, Rihao Qu, Ruaidhrí P. Jackson, Justin A. Shyer, Holly R. Steach, Yuval Kluger, Loyal A. Goff, John L. Rinn, Adam Williams, Jorge Henao-Mejia, and Richard A. Flavell
      PNAS January 19, 2021 118 (3) e1918062118; https://doi.org/10.1073/pnas.1918062118
    • You have access
      Altered ratio of dendritic cell subsets in skin-draining lymph nodes promotes Th2-driven contact hypersensitivity
      Hannah L. Miller, Prabhakar Sairam Andhey, Melissa K. Swiecki, Bruce A. Rosa, Konstantin Zaitsev, Alexandra-Chloe Villani, Makedonka Mitreva, Maxim N. Artyomov, Susan Gilfillan, Marina Cella, and Marco Colonna
      PNAS January 19, 2021 118 (3) e2021364118; https://doi.org/10.1073/pnas.2021364118
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      Acute skin exposure to ultraviolet light triggers neutrophil-mediated kidney inflammation
      Sladjana Skopelja-Gardner, Joyce Tai, Xizhang Sun, Lena Tanaka, James A. Kuchenbecker, Jessica M. Snyder, Paul Kubes, Tomas Mustelin, and Keith B. Elkon
      PNAS January 19, 2021 118 (3) e2019097118; https://doi.org/10.1073/pnas.2019097118
    • You have access
      Prior activation state shapes the microglia response to antihuman TREM2 in a mouse model of Alzheimer’s disease
      Daniel C. Ellwanger, Shoutang Wang, Simone Brioschi, Zhifei Shao, Lydia Green, Ryan Case, Daniel Yoo, Dawn Weishuhn, Palaniswami Rathanaswami, Jodi Bradley, Sara Rao, Diana Cha, Peng Luan, Shilpa Sambashivan, Susan Gilfillan, Samuel A. Hasson, Ian N. Foltz, Menno van Lookeren Campagne, and Marco Colonna
      PNAS January 19, 2021 118 (3) e2017742118; https://doi.org/10.1073/pnas.2017742118
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      An unconventional role of an ASB family protein in NF-κB activation and inflammatory response during microbial infection and colitis
      Panpan Hou, Penghui Jia, Kongxiang Yang, Zibo Li, Tian Tian, Yuxin Lin, Weijie Zeng, Fan Xing, Yu Chen, Chunmei Li, Yingfang Liu, and Deyin Guo
      PNAS January 19, 2021 118 (3) e2015416118; https://doi.org/10.1073/pnas.2015416118
  • Medical Sciences

    • Open Access
      In silico dynamics of COVID-19 phenotypes for optimizing clinical management
      Chrysovalantis Voutouri, Mohammad Reza Nikmaneshi, C. Corey Hardin, Ankit B. Patel, Ashish Verma, Melin J. Khandekar, Sayon Dutta, Triantafyllos Stylianopoulos, Lance L. Munn, and Rakesh K. Jain
      PNAS January 19, 2021 118 (3) e2021642118; https://doi.org/10.1073/pnas.2021642118
    • Open Access
      The high-affinity immunoglobulin receptor FcγRI potentiates HIV-1 neutralization via antibodies against the gp41 N-heptad repeat
      David C. Montefiori, Maria V. Filsinger Interrante, Benjamin N. Bell, Adonis A. Rubio, Joseph G. Joyce, John W. Shiver, Celia C. LaBranche, and Peter S. Kim
      PNAS January 19, 2021 118 (3) e2018027118; https://doi.org/10.1073/pnas.2018027118
    • Open Access
      Kallikrein directly interacts with and activates Factor IX, resulting in thrombin generation and fibrin formation independent of Factor XI
      Katherine J. Kearney, Juliet Butler, Olga M. Posada, Clare Wilson, Samantha Heal, Majid Ali, Lewis Hardy, Josefin Ahnström, David Gailani, Richard Foster, Emma Hethershaw, Colin Longstaff, and Helen Philippou
      PNAS January 19, 2021 118 (3) e2014810118; https://doi.org/10.1073/pnas.2014810118
    • You have access
      The secretome mouse provides a genetic platform to delineate tissue-specific in vivo secretion
      Jie Liu, Ji Yong Jang, Mehdi Pirooznia, Shihui Liu, and Toren Finkel
      PNAS January 19, 2021 118 (3) e2005134118; https://doi.org/10.1073/pnas.2005134118
  • Microbiology

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      Oncogenic HPV promotes the expression of the long noncoding RNA lnc-FANCI-2 through E7 and YY1
      Haibin Liu, Junfen Xu, Yanqin Yang, Xiaohong Wang, Ethan Wu, Vladimir Majerciak, Tingting Zhang, Renske D. M. Steenbergen, Hsu-Kun Wang, Nilam S. Banerjee, Yang Li, Weiguo Lu, Craig Meyers, Jun Zhu, Xing Xie, Louise T. Chow, and Zhi-Ming Zheng
      PNAS January 19, 2021 118 (3) e2014195118; https://doi.org/10.1073/pnas.2014195118
    • Open Access
      Human species D adenovirus hexon capsid protein mediates cell entry through a direct interaction with CD46
      B. David Persson, Lijo John, Karim Rafie, Michael Strebl, Lars Frängsmyr, Monika Z. Ballmann, Katja Mindler, Menzo Havenga, Angelique Lemckert, Thilo Stehle, Lars-Anders Carlson, and Niklas Arnberg
      PNAS January 19, 2021 118 (3) e2020732118; https://doi.org/10.1073/pnas.2020732118
    • You have access
      Hepatitis B virus X protein recruits methyltransferases to affect cotranscriptional N6-methyladenosine modification of viral/host RNAs
      Geon-Woo Kim and Aleem Siddiqui
      PNAS January 19, 2021 118 (3) e2019455118; https://doi.org/10.1073/pnas.2019455118
    • You have access
      Design of a native-like secreted form of the hepatitis C virus E1E2 heterodimer
      Johnathan D. Guest, Ruixue Wang, Khadija H. Elkholy, Andrezza Chagas, Kinlin L. Chao, Thomas E. Cleveland IV, Young Chang Kim, Zhen-Yong Keck, Alexander Marin, Abdul S. Yunus, Roy A. Mariuzza, Alexander K. Andrianov, Eric A. Toth, Steven K. H. Foung, Brian G. Pierce, and Thomas R. Fuerst
      PNAS January 19, 2021 118 (3) e2015149118; https://doi.org/10.1073/pnas.2015149118
  • Neuroscience

    • Open Access
      Unsupervised neural network models of the ventral visual stream
      Chengxu Zhuang, Siming Yan, Aran Nayebi, Martin Schrimpf, Michael C. Frank, James J. DiCarlo, and Daniel L. K. Yamins
      PNAS January 19, 2021 118 (3) e2014196118; https://doi.org/10.1073/pnas.2014196118
    • Open Access
      Prediction of Alzheimer’s disease-specific phospholipase c gamma-1 SNV by deep learning-based approach for high-throughput screening
      Sung-Hyun Kim, Sumin Yang, Key-Hwan Lim, Euiseng Ko, Hyun-Jun Jang, Mingon Kang, Pann-Ghill Suh, and Jae-Yeol Joo
      PNAS January 19, 2021 118 (3) e2011250118; https://doi.org/10.1073/pnas.2011250118
    • Open Access
      LGI1–ADAM22–MAGUK configures transsynaptic nanoalignment for synaptic transmission and epilepsy prevention
      Yuko Fukata, Xiumin Chen, Satomi Chiken, Yoko Hirano, Atsushi Yamagata, Hiroki Inahashi, Makoto Sanbo, Hiromi Sano, Teppei Goto, Masumi Hirabayashi, Hans-Christian Kornau, Harald Prüss, Atsushi Nambu, Shuya Fukai, Roger A. Nicoll, and Masaki Fukata
      PNAS January 19, 2021 118 (3) e2022580118; https://doi.org/10.1073/pnas.2022580118
    • Open Access
      Regulation of a subset of release-ready vesicles by the presynaptic protein Mover
      Ermis Pofantis, Erwin Neher, and Thomas Dresbach
      PNAS January 19, 2021 118 (3) e2022551118; https://doi.org/10.1073/pnas.2022551118
    • You have access
      Invariant timescale hierarchy across the cortical somatosensory network
      Román Rossi-Pool, Antonio Zainos, Manuel Alvarez, Sergio Parra, Jerónimo Zizumbo, and Ranulfo Romo
      PNAS January 19, 2021 118 (3) e2021843118; https://doi.org/10.1073/pnas.2021843118
    • You have access
      Multiple signaling pathways are essential for synapse formation induced by synaptic adhesion molecules
      Xian Jiang, Richard Sando, and Thomas C. Südhof
      PNAS January 19, 2021 118 (3) e2000173118; https://doi.org/10.1073/pnas.2000173118
    • Open Access
      An immunohistochemical study of lymphatic elements in the human brain
      Éva Mezey, Ildikó Szalayova, Christopher T. Hogden, Alexandra Brady, Ágnes Dósa, Péter Sótonyi, and Miklós Palkovits
      PNAS January 19, 2021 118 (3) e2002574118; https://doi.org/10.1073/pnas.2002574118
    • You have access
      Crucial role for CA2 inputs in the sequential organization of CA1 time cells supporting memory
      • From the Cover
      Christopher J. MacDonald and Susumu Tonegawa
      PNAS January 19, 2021 118 (3) e2020698118; https://doi.org/10.1073/pnas.2020698118
    • You have access
      Drebrin regulates cytoskeleton dynamics in migrating neurons through interaction with CXCR4
      Yufei Shan, Stephen Matthew Farmer, and Susan Wray
      PNAS January 19, 2021 118 (3) e2009493118; https://doi.org/10.1073/pnas.2009493118
    • You have access
      A subset of spinal dorsal horn interneurons crucial for gating touch-evoked pain-like behavior
      Ryoichi Tashima, Keisuke Koga, Yu Yoshikawa, Misuzu Sekine, Moeka Watanabe, Hidetoshi Tozaki-Saitoh, Hidemasa Furue, Toshiharu Yasaka, and Makoto Tsuda
      PNAS January 19, 2021 118 (3) e2021220118; https://doi.org/10.1073/pnas.2021220118
    • Open Access
      Astrocytic cAMP modulates memory via synaptic plasticity
      Zhiwen Zhou, Kazuki Okamoto, Junya Onodera, Toshimitsu Hiragi, Megumi Andoh, Masahito Ikawa, Kenji F. Tanaka, Yuji Ikegaya, and Ryuta Koyama
      PNAS January 19, 2021 118 (3) e2016584118; https://doi.org/10.1073/pnas.2016584118
    • Open Access
      A link between synaptic plasticity and reorganization of brain activity in Parkinson's disease
      Diliana Rebelo, Francisco Oliveira, Antero Abrunhosa, Cristina Januário, João Lemos, and Miguel Castelo-Branco
      PNAS January 19, 2021 118 (3) e2013962118; https://doi.org/10.1073/pnas.2013962118
    • Open Access
      The natural axis of transmitter receptor distribution in the human cerebral cortex
      Alexandros Goulas, Jean-Pierre Changeux, Konrad Wagstyl, Katrin Amunts, Nicola Palomero-Gallagher, and Claus C. Hilgetag
      PNAS January 19, 2021 118 (3) e2020574118; https://doi.org/10.1073/pnas.2020574118
  • Pharmacology

    • Open Access
      Orthosteric–allosteric dual inhibitors of PfHT1 as selective antimalarial agents
      Jian Huang, Yafei Yuan, Na Zhao, Debing Pu, Qingxuan Tang, Shuo Zhang, Shuchen Luo, Xikang Yang, Nan Wang, Yu Xiao, Tuan Zhang, Zhuoyi Liu, Tomoyo Sakata-Kato, Xin Jiang, Nobutaka Kato, Nieng Yan, and Hang Yin
      PNAS January 19, 2021 118 (3) e2017749118; https://doi.org/10.1073/pnas.2017749118
  • Physiology

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      Goblet cell LRRC26 regulates BK channel activation and protects against colitis in mice
      Vivian Gonzalez-Perez, Pedro L. Martinez-Espinosa, Monica Sala-Rabanal, Nikhil Bharadwaj, Xiao-Ming Xia, Albert C. Chen, David Alvarado, Jenny K. Gustafsson, Hongzhen Hu, Matthew A. Ciorba, and Christopher J. Lingle
      PNAS January 19, 2021 118 (3) e2019149118; https://doi.org/10.1073/pnas.2019149118
  • Plant Biology

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      Chromatin phosphoproteomics unravels a function for AT-hook motif nuclear localized protein AHL13 in PAMP-triggered immunity
      Naganand Rayapuram, Mai Jarad, Hanna M. Alhoraibi, Jean Bigeard, Aala A. Abulfaraj, Ronny Völz, Kiruthiga Gayathri Mariappan, Marilia Almeida-Trapp, Maria Schlöffel, Emmanuelle Lastrucci, Ludovic Bonhomme, Andrea A. Gust, Axel Mithöfer, Stefan T. Arold, Delphine Pflieger, and Heribert Hirt
      PNAS January 19, 2021 118 (3) e2004670118; https://doi.org/10.1073/pnas.2004670118
  • Sustainability Science

    • You have access
      The decline of mammal functional and evolutionary diversity worldwide
      • From the Cover
      Jedediah F. Brodie, Sara Williams, and Brittany Garner
      PNAS January 19, 2021 118 (3) e1921849118; https://doi.org/10.1073/pnas.1921849118
  • Systems Biology

    • Open Access
      Systematic analysis of differential rhythmic liver gene expression mediated by the circadian clock and feeding rhythms
      Benjamin D. Weger, Cédric Gobet, Fabrice P. A. David, Florian Atger, Eva Martin, Nicholas E. Phillips, Aline Charpagne, Meltem Weger, Felix Naef, and Frédéric Gachon
      PNAS January 19, 2021 118 (3) e2015803118; https://doi.org/10.1073/pnas.2015803118

Correction

  • You have access
    Correction for Silva et al., Repurposing a peptide toxin from wasp venom into antiinfectives with dual antimicrobial and immunomodulatory properties
    PNAS January 19, 2021 118 (3) e2025351118; https://doi.org/10.1073/pnas.2025351118
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Proceedings of the National Academy of Sciences: 118 (3)
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