Table of Contents

Research Article

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  Pufferfish and new paradigm for comparative genome analysis

  B F Koop and J H Nadeau

  PNAS February 20, 1996 93 (4) 1363-1365; https://doi.org/10.1073/pnas.93.4.1363

  See companion article:

  • Conservation of synteny between the genome of the pufferfish (Fugu rubripes) and the region on human chromosome 14 (14q24.3) associated with familial Alzheimer disease (AD3 locus)

    - Feb 20, 1996
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  Conservation of synteny between the genome of the pufferfish (Fugu rubripes) and the region on human chromosome 14 (14q24.3) associated with familial Alzheimer disease (AD3 locus)

  M K Trower, S M Orton, I J Purvis, P Sanseau, J Riley, C Christodoulou, D Burt, C G See, G Elgar, R Sherrington, E I Rogaev, P St George-Hyslop, S Brenner, and C W Dykes

  PNAS February 20, 1996 93 (4) 1366-1369; https://doi.org/10.1073/pnas.93.4.1366

  See companion article:

  • Pufferfish and new paradigm for comparative genome analysis

    - Feb 20, 1996
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  Mapping nucleosome position at single base-pair resolution by using site-directed hydroxyl radicals

  A Flaus, K Luger, S Tan, and T J Richmond

  PNAS February 20, 1996 93 (4) 1370-1375; https://doi.org/10.1073/pnas.93.4.1370
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  Reconstitution of repair-gap UV mutagenesis with purified proteins from Escherichia coli: a role for DNA polymerases III and II

  G Tomer, O Cohen-Fix, M O'Donnell, M Goodman, and Z Livneh

  PNAS February 20, 1996 93 (4) 1376-1380; https://doi.org/10.1073/pnas.93.4.1376
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  Interisland and interarchipelago transfer of stone tools in prehistoric Polynesia

  M I Weisler and P V Kirch

  PNAS February 20, 1996 93 (4) 1381-1385; https://doi.org/10.1073/pnas.93.4.1381
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  Structure of the N intermediate of bacteriorhodopsin revealed by x-ray diffraction

  H Kamikubo, M Kataoka, G Váró, T Oka, F Tokunaga, R Needleman, and J K Lanyi

  PNAS February 20, 1996 93 (4) 1386-1390; https://doi.org/10.1073/pnas.93.4.1386
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  A heterotrimeric G protein complex couples the muscarinic m1 receptor to phospholipase C-beta

  E Dippel, F Kalkbrenner, B Wittig, and G Schultz

  PNAS February 20, 1996 93 (4) 1391-1396; https://doi.org/10.1073/pnas.93.4.1391
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  Self-assembly of a heteroduplex helicate from two different ligand strands and Cu(II) cations

  B Hasenknopf, J M Lehn, G Baum, and D Fenske

  PNAS February 20, 1996 93 (4) 1397-1400; https://doi.org/10.1073/pnas.93.4.1397
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  Kinetic discrimination in T-cell activation

  J D Rabinowitz, C Beeson, D S Lyons, M M Davis, and H M McConnell

  PNAS February 20, 1996 93 (4) 1401-1405; https://doi.org/10.1073/pnas.93.4.1401
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  Correlation between the effects of bombesin antagonists on cell proliferation and intracellular calcium concentration in Swiss 3T3 and HT-29 cell lines

  F F Casanueva, F R Perez, X Casabiell, J P Camiña, R Z Cai, and A V Schally

  PNAS February 20, 1996 93 (4) 1406-1411; https://doi.org/10.1073/pnas.93.4.1406
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  Poliovirus chimeras replicating under the translational control of genetic elements of hepatitis C virus reveal unusual properties of the internal ribosomal entry site of hepatitis C virus

  H H Lu and E Wimmer

  PNAS February 20, 1996 93 (4) 1412-1417; https://doi.org/10.1073/pnas.93.4.1412
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  Twenty-five coregulated transcripts define a sterigmatocystin gene cluster in Aspergillus nidulans

  D W Brown, J H Yu, H S Kelkar, M Fernandes, T C Nesbitt, N P Keller, T H Adams, and T J Leonard

  PNAS February 20, 1996 93 (4) 1418-1422; https://doi.org/10.1073/pnas.93.4.1418
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  Localization of 17beta-hydroxysteroid dehydrogenase and characterization of testosterone in the brain of the male frog

  A M Mensah-Nyagan, M Feuilloley, J L Do-Rego, A Marcual, C Lange, M C Tonon, G Pelletier, and H Vaudry

  PNAS February 20, 1996 93 (4) 1423-1428; https://doi.org/10.1073/pnas.93.4.1423
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  Adrenocortical suppression blocks the memory-enhancing effects of amphetamine and epinephrine

  B Roozendaal, O Carmi, and J L McGaugh

  PNAS February 20, 1996 93 (4) 1429-1433; https://doi.org/10.1073/pnas.93.4.1429
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  The human lysozyme promoter directs reporter gene expression to activated myelomonocytic cells in transgenic mice

  S Clarke, D R Greaves, L P Chung, P Tree, and S Gordon

  PNAS February 20, 1996 93 (4) 1434-1438; https://doi.org/10.1073/pnas.93.4.1434
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  E2F1 and E1A(12S) have a homologous activation domain regulated by RB and CBP

  D Trouche and T Kouzarides

  PNAS February 20, 1996 93 (4) 1439-1442; https://doi.org/10.1073/pnas.93.4.1439
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  Tiggers and DNA transposon fossils in the human genome

  A F Smit and A D Riggs

  PNAS February 20, 1996 93 (4) 1443-1448; https://doi.org/10.1073/pnas.93.4.1443
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  Heat shock induces a loss of rRNA-encoding DNA repeats in Brassica nigra

  E R Waters and B A Schaal

  PNAS February 20, 1996 93 (4) 1449-1452; https://doi.org/10.1073/pnas.93.4.1449
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  Physical and functional independency of p70 and p58 natural killer (NK) cell receptors for HLA class I: their role in the definition of different groups of alloreactive NK cell clones

  M Vitale, S Sivori, D Pende, R Augugliaro, C Di Donato, A Amoroso, M Malnati, C Bottino, L Moretta, and A Moretta

  PNAS February 20, 1996 93 (4) 1453-1457; https://doi.org/10.1073/pnas.93.4.1453
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  Superior efficacy of secreted over somatic antigen display in recombinant Salmonella vaccine induced protection against listeriosis

  J Hess, I Gentschev, D Miko, M Welzel, C Ladel, W Goebel, and S H Kaufmann

  PNAS February 20, 1996 93 (4) 1458-1463; https://doi.org/10.1073/pnas.93.4.1458
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  Biosynthesis of major histocompatibility complex molecules and generation of T cells in Ii TAP1 double-mutant mice

  S Tourne, H M van Santen, M van Roon, A Berns, C Benoist, D Mathis, and H Ploegh

  PNAS February 20, 1996 93 (4) 1464-1469; https://doi.org/10.1073/pnas.93.4.1464
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  Self-renewal of primitive human hematopoietic cells (long-term-culture-initiating cells) in vitro and their expansion in defined medium

  A L Petzer, D E Hogge, P M Landsdorp, D S Reid, and C J Eaves

  PNAS February 20, 1996 93 (4) 1470-1474; https://doi.org/10.1073/pnas.93.4.1470
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  Regulation of phosducin phosphorylation in retinal rods by Ca2+/calmodulin-dependent adenylyl cyclase

  B M Willardson, J F Wilkins, T Yoshida, and M W Bitensky

  PNAS February 20, 1996 93 (4) 1475-1479; https://doi.org/10.1073/pnas.93.4.1475
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  cGMP mediates the vascular and platelet actions of nitric oxide: confirmation using an inhibitor of the soluble guanylyl cyclase

  M A Moro, R J Russel, S Cellek, I Lizasoain, Y Su, V M Darley-Usmar, M W Radomski, and S Moncada

  PNAS February 20, 1996 93 (4) 1480-1485; https://doi.org/10.1073/pnas.93.4.1480
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  Determinants of the G protein-dependent opioid modulation of neuronal calcium channels

  E Bourinet, T W Soong, A Stea, and T P Snutch

  PNAS February 20, 1996 93 (4) 1486-1491; https://doi.org/10.1073/pnas.93.4.1486
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  Quenching of chlorophyll fluorescence in the major light-harvesting complex of photosystem II: a systematic study of the effect of carotenoid structure

  D Phillip, A V Ruban, P Horton, A Asato, and A J Young

  PNAS February 20, 1996 93 (4) 1492-1497; https://doi.org/10.1073/pnas.93.4.1492
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  In vivo protein-DNA interactions at human DNA replication origin

  D S Dimitrova, M Giacca, F Demarchi, G Biamonti, S Riva, and A Falaschi

  PNAS February 20, 1996 93 (4) 1498-1503; https://doi.org/10.1073/pnas.93.4.1498
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  Unusual dynamics of extinction in a simple ecological model

  S Sinha and S Parthasarathy

  PNAS February 20, 1996 93 (4) 1504-1508; https://doi.org/10.1073/pnas.93.4.1504
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  Mutagenesis of the potato ADPglucose pyrophosphorylase and characterization of an allosteric mutant defective in 3-phosphoglycerate activation

  T W Greene, S E Chantler, M L Kahn, G F Barry, J Preiss, and T W Okita

  PNAS February 20, 1996 93 (4) 1509-1513; https://doi.org/10.1073/pnas.93.4.1509
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  Numerical representations in primates

  M D Hauser, P MacNeilage, and M Ware

  PNAS February 20, 1996 93 (4) 1514-1517; https://doi.org/10.1073/pnas.93.4.1514
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  Differentiation of the immortalized adult neuronal progenitor cell line HC2S2 into neurons by regulatable suppression of the v-myc oncogene

  M Hoshimaru, J Ray, D W Sah, and F H Gage

  PNAS February 20, 1996 93 (4) 1518-1523; https://doi.org/10.1073/pnas.93.4.1518
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  Polycystin, the polycystic kidney disease 1 protein, is expressed by epithelial cells in fetal, adult, and polycystic kidney

  C J Ward, H Turley, A C Ong, M Comley, S Biddolph, R Chetty, P J Ratcliffe, K Gattner, and P C Harris

  PNAS February 20, 1996 93 (4) 1524-1528; https://doi.org/10.1073/pnas.93.4.1524
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  beta2 knockout mice develop parenchymal iron overload: A putative role for class I genes of the major histocompatibility complex in iron metabolism

  B E Rothenberg and J R Voland

  PNAS February 20, 1996 93 (4) 1529-1534; https://doi.org/10.1073/pnas.93.4.1529
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  Mutational properties of the primary aflatoxin B1-DNA adduct

  E A Bailey, R S Iyer, M P Stone, T M Harris, and J M Essigmann

  PNAS February 20, 1996 93 (4) 1535-1539; https://doi.org/10.1073/pnas.93.4.1535
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  Distinct ligand preferences of Src homology 3 domains from Src, Yes, Abl, Cortactin, p53bp2, PLCgamma, Crk, and Grb2

  A B Sparks, J E Rider, N G Hoffman, D M Fowlkes, L A Quillam, and B K Kay

  PNAS February 20, 1996 93 (4) 1540-1544; https://doi.org/10.1073/pnas.93.4.1540
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  Reaction of the Escherichia coli quinol oxidase cytochrome bo3 with dioxygen: the role of a bound ubiquinone molecule

  A Puustinen, M I Verkhovsky, J E Morgan, N P Belevich, and M Wikstrom

  PNAS February 20, 1996 93 (4) 1545-1548; https://doi.org/10.1073/pnas.93.4.1545
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  Cell-cell communication regulates the effects of protein aspartate phosphatases on the phosphorelay controlling development in Bacillus subtilis

  M Perego and J A Hoch

  PNAS February 20, 1996 93 (4) 1549-1553; https://doi.org/10.1073/pnas.93.4.1549
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  Skeletal matrices, muci, and the origin of invertebrate calcification

  F Marin, M Smith, Y Isa, G Muyzer, and P Westbroek

  PNAS February 20, 1996 93 (4) 1554-1559; https://doi.org/10.1073/pnas.93.4.1554
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  Trinucleotide repeats and long homopeptides in genes and proteins associated with nervous system disease and development

  S Karlin and C Burge

  PNAS February 20, 1996 93 (4) 1560-1565; https://doi.org/10.1073/pnas.93.4.1560
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  cdc18+ regulates initiation of DNA replication in Schizosaccharomyces pombe

  M Muzi Falconi, G W Brown, and T J Kelly

  PNAS February 20, 1996 93 (4) 1566-1570; https://doi.org/10.1073/pnas.93.4.1566
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  Impaired hippocampal plasticity in mice lacking the Cbeta1 catalytic subunit of cAMP-dependent protein kinase

  M Qi, M Zhuo, B S Skålhegg, E P Brandon, E R Kandel, G S McKnight, and R L Idzerda

  PNAS February 20, 1996 93 (4) 1571-1576; https://doi.org/10.1073/pnas.93.4.1571
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  Peptides containing a consensus Ras binding sequence from Raf-1 and theGTPase activating protein NF1 inhibit Ras function

  G J Clark, J K Drugan, R S Terrell, C Bradham, C J Der, R M Bell, and S Campbell

  PNAS February 20, 1996 93 (4) 1577-1581; https://doi.org/10.1073/pnas.93.4.1577
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  Mass extinctions and supernova explosions

  P J Crutzen and C Brühl

  PNAS February 20, 1996 93 (4) 1582-1584; https://doi.org/10.1073/pnas.93.4.1582
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  Cationic facial amphiphiles: a promising class of transfection agents

  S Walker, M J Sofia, R Kakarla, N A Kogan, L Wierichs, C B Longley, K Bruker, H R Axelrod, S Midha, S Babu, and D Kahne

  PNAS February 20, 1996 93 (4) 1585-1590; https://doi.org/10.1073/pnas.93.4.1585
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  A fast marching level set method for monotonically advancing fronts

  J A Sethian

  PNAS February 20, 1996 93 (4) 1591-1595; https://doi.org/10.1073/pnas.93.4.1591
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  An RNA structure involved in feedback regulation of splicing and of translation is critical for biological fitness

  B Li, J Vilardell, and J R Warner

  PNAS February 20, 1996 93 (4) 1596-1600; https://doi.org/10.1073/pnas.93.4.1596
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  In vivo and in vitro characterization of the B1 and B2 zinc-binding domains from the acute promyelocytic leukemia protooncoprotein PML

  K L Borden, J M Lally, S R Martin, N J O'Reilly, E Solomon, and P S Freemont

  PNAS February 20, 1996 93 (4) 1601-1606; https://doi.org/10.1073/pnas.93.4.1601
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  Overexpression of a Rrp1 transgene reduces the somatic mutation and recombination frequency induced by oxidative DNA damage in Drosophila melanogaster

  A Szakmary, S M Huang, D T Chang, P A Beachy, and M Sander

  PNAS February 20, 1996 93 (4) 1607-1612; https://doi.org/10.1073/pnas.93.4.1607
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  Agrobacterium tumefaciens-mediated transformation of yeast

  K L Piers, J D Heath, X Liang, K M Stephens, and E W Nester

  PNAS February 20, 1996 93 (4) 1613-1618; https://doi.org/10.1073/pnas.93.4.1613
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  Persistent elevations of cerebrospinal fluid concentrations of corticotropin-releasing factor in adult nonhuman primates exposed to early-life stressors: implications for the pathophysiology of mood and anxiety disorders

  J D Coplan, M W Andrews, L A Rosenblum, M J Owens, S Friedman, J M Gorman, and C B Nemeroff

  PNAS February 20, 1996 93 (4) 1619-1623; https://doi.org/10.1073/pnas.93.4.1619
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  Surface blebs on apoptotic cells are sites of enhanced procoagulant activity: implications for coagulation events and antigenic spread in systemic lupus erythematosus

  L Casciola-Rosen, A Rosen, M Petri, and M Schlissel

  PNAS February 20, 1996 93 (4) 1624-1629; https://doi.org/10.1073/pnas.93.4.1624
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  Core binding factor beta-smooth muscle myosin heavy chain chimeric protein involved in acute myeloid leukemia forms unusual nuclear rod-like structures in transformed NIH 3T3 cells

  C Wijmenga, P E Gregory, A Hajra, E Schröck, T Ried, R Eils, P P Liu, and F S Collins

  PNAS February 20, 1996 93 (4) 1630-1635; https://doi.org/10.1073/pnas.93.4.1630
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  Immunocytochemical localization of the endogenous neuroexcitotoxin quinolinate in human peripheral blood monocytes/macrophages and the effect of human T-cell lymphotropic virus type I infection

  C N Venkateshan, R Narayanan, M G Espey, J R Moffett, D C Gajdusek, C J Gibbs Jr, and M A Namboodiri

  PNAS February 20, 1996 93 (4) 1636-1641; https://doi.org/10.1073/pnas.93.4.1636
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  Intergenic splicing of MDS1 and EVI1 occurs in normal tissues as well as in myeloid leukemia and produces a new member of the PR domain family

  S Fears, C Mathieu, N Zeleznik-Le, S Huang, J D Rowley, and G Nucifora

  PNAS February 20, 1996 93 (4) 1642-1647; https://doi.org/10.1073/pnas.93.4.1642
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  Human immunodeficiency virus type 1 viral background plays a major role in development of resistance to protease inhibitors

  R E Rose, Y F Gong, J A Greytok, C M Bechtold, B J Terry, B S Robinson, M Alam, R J Colonno, and P F Lin

  PNAS February 20, 1996 93 (4) 1648-1653; https://doi.org/10.1073/pnas.93.4.1648
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  Learning and recall of form discriminations during reversible cooling deactivation of ventral-posterior suprasylvian cortex in the cat

  S G Lomber, B R Payne, and P Cornwell

  PNAS February 20, 1996 93 (4) 1654-1658; https://doi.org/10.1073/pnas.93.4.1654
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  The cutoff phenomenon in finite Markov chains

  P Diaconis

  PNAS February 20, 1996 93 (4) 1659-1664; https://doi.org/10.1073/pnas.93.4.1659
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  An abundantly expressed mucin-like protein from Toxocara canis infective larvae: the precursor of the larval surface coat glycoproteins

  D Gems and R M Maizels

  PNAS February 20, 1996 93 (4) 1665-1670; https://doi.org/10.1073/pnas.93.4.1665
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  Cyp1a2(-/-) null mutant mice develop normally but show deficient drug metabolism

  H C Liang, H Li, R A McKinnon, J J Duffy, S S Potter, A Puga, and D W Nebert

  PNAS February 20, 1996 93 (4) 1671-1676; https://doi.org/10.1073/pnas.93.4.1671
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  An induction gene trap screen in embryonic stem cells: Identification of genes that respond to retinoic acid in vitro

  L M Forrester, A Nagy, M Sam, A Watt, L Stevenson, A Bernstein, A L Joyner, and W Wurst

  PNAS February 20, 1996 93 (4) 1677-1682; https://doi.org/10.1073/pnas.93.4.1677
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  Signal transduction by activated mNotch: importance of proteolytic processing and its regulation by the extracellular domain

  R Kopan, E H Schroeter, H Weintraub, and J S Nye

  PNAS February 20, 1996 93 (4) 1683-1688; https://doi.org/10.1073/pnas.93.4.1683
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  The 145-kDa protein induced to associate with Shc by multiple cytokines is an inositol tetraphosphate and phosphatidylinositol 3,4,5-triphosphate 5-phosphatase

  J E Damen, L Liu, P Rosten, R K Humphries, A B Jefferson, P W Majerus, and G Krystal

  PNAS February 20, 1996 93 (4) 1689-1693; https://doi.org/10.1073/pnas.93.4.1689
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  Sequence scanning: A method for rapid sequence acquisition from large-fragment DNA clones

  D I Nurminsky and D L Hartl

  PNAS February 20, 1996 93 (4) 1694-1698; https://doi.org/10.1073/pnas.93.4.1694
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  Induction of cellular immunity in chimpanzees to human tumor-associated antigen mucin by vaccination with MUC-1 cDNA-transfected Epstein-Barr virus-immortalized autologous B cells

  G Pecher and O J Finn

  PNAS February 20, 1996 93 (4) 1699-1704; https://doi.org/10.1073/pnas.93.4.1699
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  On the origin of the order Artiodactyla

  K D Rose

  PNAS February 20, 1996 93 (4) 1705-1709; https://doi.org/10.1073/pnas.93.4.1705
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  Zn2+ interaction with Alzheimer amyloid beta protein calcium channels

  N Arispe, H B Pollard, and E Rojas

  PNAS February 20, 1996 93 (4) 1710-1715; https://doi.org/10.1073/pnas.93.4.1710
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  The treatment of chronic progressive multiple sclerosis with cladribine

  E Beutler, J C Sipe, J S Romine, J A Koziol, R McMillan, and J Zyroff

  PNAS February 20, 1996 93 (4) 1716-1720; https://doi.org/10.1073/pnas.93.4.1716
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  Ca(2+)-independent reduction of N-methyl-D-aspartate channel activity by protein tyrosine phosphatase

  Y T Wang, X M Yu, and M W Salter

  PNAS February 20, 1996 93 (4) 1721-1725; https://doi.org/10.1073/pnas.93.4.1721
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  Decreased food intake does not completely account for adiposity reduction after ob protein infusion

  N Levin, C Nelson, A Gurney, R Vandlen, and F de Sauvage

  PNAS February 20, 1996 93 (4) 1726-1730; https://doi.org/10.1073/pnas.93.4.1726
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  Determination of the transiently lowered pKa of the retinal Schiff base during the photocycle of bacteriorhodopsin

  L S Brown and J K Lanyi

  PNAS February 20, 1996 93 (4) 1731-1734; https://doi.org/10.1073/pnas.93.4.1731