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Research Article

Essential genes from Arctic bacteria used to construct stable, temperature-sensitive bacterial vaccines

Barry N. Duplantis, Milan Osusky, Crystal L. Schmerk, Darrell R. Ross, Catharine M. Bosio, and Francis E. Nano
  1. aDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, V8W 3P6 Canada; and
  2. bLaboratory of Intracellular Parasites, Rocky Mountain Laboratories, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840

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PNAS first published July 12, 2010; https://doi.org/10.1073/pnas.1004119107
Barry N. Duplantis
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Milan Osusky
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Crystal L. Schmerk
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Darrell R. Ross
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Catharine M. Bosio
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Francis E. Nano
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  • For correspondence: fnano@uvic.ca
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Abstract

All bacteria share a set of evolutionarily conserved essential genes that encode products that are required for viability. The great diversity of environments that bacteria inhabit, including environments at extreme temperatures, place adaptive pressure on essential genes. We sought to use this evolutionary diversity of essential genes to engineer bacterial pathogens to be stably temperature-sensitive, and thus useful as live vaccines. We isolated essential genes from bacteria found in the Arctic and substituted them for their counterparts into pathogens of mammals. We found that substitution of nine different essential genes from psychrophilic (cold-loving) bacteria into mammalian pathogenic bacteria resulted in strains that died below their normal-temperature growth limits. Substitution of three different psychrophilic gene orthologs of ligA, which encode NAD-dependent DNA ligase, resulted in bacterial strains that died at 33, 35, and 37 °C. One ligA gene was shown to render Francisella tularensis, Salmonella enterica, and Mycobacterium smegmatis temperature-sensitive, demonstrating that this gene functions in both Gram-negative and Gram-positive lineage bacteria. Three temperature-sensitive F. tularensis strains were shown to induce protective immunity after vaccination at a cool body site. About half of the genes that could be tested were unable to mutate to temperature-resistant forms at detectable levels. These results show that psychrophilic essential genes can be used to create a unique class of bacterial temperature-sensitive vaccines for important human pathogens, such as S. enterica and Mycobacterium tuberculosis.

  • psychrophile
  • Colwellia
  • Francisella
  • Mycobacterium

Footnotes

  • 1To whom correspondence should be addressed. E-mail: fnano{at}uvic.ca.
  • Author contributions: B.N.D., M.O., D.R.R., C.M.B., and F.E.N. designed research; B.N.D., M.O., C.L.S., D.R.R., and C.M.B. performed research; B.N.D., M.O., C.M.B., and F.E.N. analyzed data; and F.E.N. wrote the paper.

  • Conflict of interest: A provisional patent application has been filed that covers much of the material in this article. F.E.N. is the inventor and he has assigned rights to the University of Victoria.

  • This article is a PNAS Direct Submission.

  • Data deposition: The sequences of the psychrophilic genes as they appear in the F. novicida chromosome have been deposited in the GenBank database (accession nos. HM003397, HM003389, HM003396, HM003395, HM003399, HM003391, HM003398, HM003392, HM003393, HM003394, HM003390, HM003400).

  • This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1004119107/-/DCSupplemental.

    Freely available online through the PNAS open access option.

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    Essential genes from Arctic bacteria used to construct stable, temperature-sensitive bacterial vaccines
    Barry N. Duplantis, Milan Osusky, Crystal L. Schmerk, Darrell R. Ross, Catharine M. Bosio, Francis E. Nano
    Proceedings of the National Academy of Sciences Jul 2010, 201004119; DOI: 10.1073/pnas.1004119107

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    Essential genes from Arctic bacteria used to construct stable, temperature-sensitive bacterial vaccines
    Barry N. Duplantis, Milan Osusky, Crystal L. Schmerk, Darrell R. Ross, Catharine M. Bosio, Francis E. Nano
    Proceedings of the National Academy of Sciences Jul 2010, 201004119; DOI: 10.1073/pnas.1004119107
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