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Research Article

An RNA virus hijacks an incognito function of a DNA repair enzyme

Richard Virgen-Slane, Janet M. Rozovics, Kerry D. Fitzgerald, Tuan Ngo, Wayne Chou, Gerbrand J. van der Heden van Noort, Dmitri V. Filippov, Paul D. Gershon, and Bert L. Semler
  1. aDepartment of Microbiology and Molecular Genetics, School of Medicine, and
  2. bDepartment of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697; and
  3. cLeiden Institute of Chemistry, Leiden University, 2300 RA Leiden, The Netherlands

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PNAS first published August 20, 2012; https://doi.org/10.1073/pnas.1208096109
Richard Virgen-Slane
aDepartment of Microbiology and Molecular Genetics, School of Medicine, and
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Janet M. Rozovics
aDepartment of Microbiology and Molecular Genetics, School of Medicine, and
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Kerry D. Fitzgerald
aDepartment of Microbiology and Molecular Genetics, School of Medicine, and
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Tuan Ngo
bDepartment of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697; and
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Wayne Chou
bDepartment of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697; and
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Gerbrand J. van der Heden van Noort
cLeiden Institute of Chemistry, Leiden University, 2300 RA Leiden, The Netherlands
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Dmitri V. Filippov
cLeiden Institute of Chemistry, Leiden University, 2300 RA Leiden, The Netherlands
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Paul D. Gershon
bDepartment of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697; and
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Bert L. Semler
aDepartment of Microbiology and Molecular Genetics, School of Medicine, and
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  • For correspondence: blsemler@uci.edu
  1. Edited* by Charles M. Rice, The Rockefeller University, New York, NY, and approved July 26, 2012 (received for review May 14, 2012)

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Abstract

A previously described mammalian cell activity, called VPg unlinkase, specifically cleaves a unique protein–RNA covalent linkage generated during the viral genomic RNA replication steps of a picornavirus infection. For over three decades, the identity of this cellular activity and its normal role in the uninfected cell had remained elusive. Here we report the purification and identification of VPg unlinkase as the DNA repair enzyme, 5′-tyrosyl–DNA phosphodiesterase-2 (TDP2). Our data show that VPg unlinkase activity in different mammalian cell lines correlates with their differential expression of TDP2. Furthermore, we show that recombinant TDP2 can cleave the protein–RNA linkage generated by different picornaviruses without impairing the integrity of viral RNA. Our results reveal a unique RNA repair-like function for TDP2 and suggest an unusual role in host–pathogen interactions for this cellular enzyme. On the basis of the identification of TDP2 as a potential antiviral target, our findings may lead to the development of universal therapeutics to treat the millions of individuals afflicted annually with diseases caused by picornaviruses, including myocarditis, aseptic meningitis, encephalitis, hepatitis, and the common cold.

  • 5′-tyrosyl-RNA phosphodiesterase
  • poliovirus
  • human rhinovirus
  • translation initiation

Footnotes

  • ↵1To whom correspondence should be addressed. E-mail: blsemler{at}uci.edu.
  • Author contributions: R.V.-S., K.D.F., and B.L.S. designed research; R.V.-S., J.M.R., K.D.F., T.N., and P.D.G. performed research; R.V.-S., J.M.R., T.N., W.C., G.J.v.d.H.v.N., D.V.F., and P.D.G. contributed new reagents/analytic tools; R.V.-S., K.D.F., T.N., P.D.G., and B.L.S. analyzed data; and R.V.-S., K.D.F., and B.L.S. wrote the paper.

  • The authors declare no conflict of interest.

  • ↵*This Direct Submission article had a prearranged editor.

  • This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1208096109/-/DCSupplemental.

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RNA virus hijacks a DNA repair function
Richard Virgen-Slane, Janet M. Rozovics, Kerry D. Fitzgerald, Tuan Ngo, Wayne Chou, Gerbrand J. van der Heden van Noort, Dmitri V. Filippov, Paul D. Gershon, Bert L. Semler
Proceedings of the National Academy of Sciences Aug 2012, 201208096; DOI: 10.1073/pnas.1208096109

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RNA virus hijacks a DNA repair function
Richard Virgen-Slane, Janet M. Rozovics, Kerry D. Fitzgerald, Tuan Ngo, Wayne Chou, Gerbrand J. van der Heden van Noort, Dmitri V. Filippov, Paul D. Gershon, Bert L. Semler
Proceedings of the National Academy of Sciences Aug 2012, 201208096; DOI: 10.1073/pnas.1208096109
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