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Research Article

ABI3 controls embryo degreening through Mendel's I locus

Frédéric Delmas, Subramanian Sankaranarayanan, Srijani Deb, Ellen Widdup, Céline Bournonville, Norbert Bollier, Julian G. B. Northey, Peter McCourt, and Marcus A. Samuel
  1. aDepartment of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3B2;
  2. bUnité Mixte de Recherche 1332, Biologie du Fruit et Pathologie, Université de Bordeaux, F-33882 Villenave d’Ornon, France;
  3. cUnité Mixte de Recherche 1332, Biologie du Fruit et Pathologie, Institut National de la Recherche Agronomique, F-33882 Villenave d’Ornon, France; and
  4. dDepartment of Biological Sciences, University of Calgary, Calgary, AB, Canada T2N 1N4

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PNAS first published September 16, 2013; https://doi.org/10.1073/pnas.1308114110
Frédéric Delmas
aDepartment of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3B2;
bUnité Mixte de Recherche 1332, Biologie du Fruit et Pathologie, Université de Bordeaux, F-33882 Villenave d’Ornon, France;
cUnité Mixte de Recherche 1332, Biologie du Fruit et Pathologie, Institut National de la Recherche Agronomique, F-33882 Villenave d’Ornon, France; and
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Subramanian Sankaranarayanan
dDepartment of Biological Sciences, University of Calgary, Calgary, AB, Canada T2N 1N4
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Srijani Deb
dDepartment of Biological Sciences, University of Calgary, Calgary, AB, Canada T2N 1N4
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Ellen Widdup
dDepartment of Biological Sciences, University of Calgary, Calgary, AB, Canada T2N 1N4
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Céline Bournonville
bUnité Mixte de Recherche 1332, Biologie du Fruit et Pathologie, Université de Bordeaux, F-33882 Villenave d’Ornon, France;
cUnité Mixte de Recherche 1332, Biologie du Fruit et Pathologie, Institut National de la Recherche Agronomique, F-33882 Villenave d’Ornon, France; and
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Norbert Bollier
bUnité Mixte de Recherche 1332, Biologie du Fruit et Pathologie, Université de Bordeaux, F-33882 Villenave d’Ornon, France;
cUnité Mixte de Recherche 1332, Biologie du Fruit et Pathologie, Institut National de la Recherche Agronomique, F-33882 Villenave d’Ornon, France; and
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Julian G. B. Northey
aDepartment of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3B2;
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Peter McCourt
aDepartment of Cell and Systems Biology, University of Toronto, Toronto, ON, Canada M5S 3B2;
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  • For correspondence: msamuel@ucalgary.ca peter.mccourt@utoronto.ca
Marcus A. Samuel
dDepartment of Biological Sciences, University of Calgary, Calgary, AB, Canada T2N 1N4
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  • For correspondence: msamuel@ucalgary.ca peter.mccourt@utoronto.ca
  1. Edited by Ottoline Leyser, University of Cambridge, Cambridge, United Kingdom, and approved August 21, 2013 (received for review May 2, 2013)

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Significance

Occurrence of mature green seeds in oil-seed crops such as canola and soybean causes severe losses in revenue. Retention of chlorophyll in seeds can be an undesirable trait as it affects seed maturation, seed oil, and meal quality. We show that the abscisic acid (ABA, plant hormone) dependent transcription factor ABSCISIC ACID INSENSITIVE 3 (ABI3), confers seed degreening by regulating Mendel’s stay-green genes. This study unveils a new role for ABI3 in removal of seed chlorophyll in addition to its functions in embryo maturation and conferring desiccation tolerance. This pathway could be manipulated to tackle the cold-induced green seed problem in oil-seed crops.

Abstract

Chlorophyll (chl) is essential for light capture and is the starting point that provides the energy for photosynthesis and thus plant growth. Obviously, for this reason, retention of the green chlorophyll pigment is considered a desirable crop trait. However, the presence of chlorophyll in mature seeds can be an undesirable trait that can affect seed maturation, seed oil quality, and meal quality. Occurrence of mature green seeds in oil crops such as canola and soybean due to unfavorable weather conditions during seed maturity is known to cause severe losses in revenue. One recently identified candidate that controls the chlorophyll degradation machinery is the stay-green gene, SGR1 that was mapped to Mendel’s I locus responsible for cotyledon color (yellow versus green) in peas. A defect in SGR1 leads to leaf stay-green phenotypes in Arabidopsis and rice, but the role of SGR1 in seed degreening and the signaling machinery that converges on SGR1 have remained elusive. To decipher the gene regulatory network that controls degreening in Arabidopsis, we have used an embryo stay-green mutant to demonstrate that embryo degreening is achieved by the SGR family and that this whole process is regulated by the phytohormone abscisic acid (ABA) through ABSCISIC ACID INSENSITIVE 3 (ABI3); a B3 domain transcription factor that has a highly conserved and essential role in seed maturation, conferring desiccation tolerance. Misexpression of ABI3 was sufficient to rescue cold-induced green seed phenotype in Arabidopsis. This finding reveals a mechanistic role for ABI3 during seed degreening and thus targeting of this pathway could provide a solution to the green seed problem in various oil-seed crops.

  • freezing tolerance
  • nondormant

Footnotes

  • ↵1To whom correspondence may be addressed. E-mail: msamuel{at}ucalgary.ca or peter.mccourt{at}utoronto.ca.
  • Author contributions: F.D., P.M., and M.A.S. designed research; F.D., S.S., S.D., E.W., C.B., N.B., J.G.B.N., and M.A.S. performed research; S.S., S.D., and M.A.S. analyzed data; and F.D., P.M., and M.A.S. wrote the paper.

  • The authors declare no conflict of interest.

  • This article is a PNAS Direct Submission.

  • This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1308114110/-/DCSupplemental.

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ABI3 controls embryo degreening
Frédéric Delmas, Subramanian Sankaranarayanan, Srijani Deb, Ellen Widdup, Céline Bournonville, Norbert Bollier, Julian G. B. Northey, Peter McCourt, Marcus A. Samuel
Proceedings of the National Academy of Sciences Sep 2013, 201308114; DOI: 10.1073/pnas.1308114110

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ABI3 controls embryo degreening
Frédéric Delmas, Subramanian Sankaranarayanan, Srijani Deb, Ellen Widdup, Céline Bournonville, Norbert Bollier, Julian G. B. Northey, Peter McCourt, Marcus A. Samuel
Proceedings of the National Academy of Sciences Sep 2013, 201308114; DOI: 10.1073/pnas.1308114110
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