Table 2. NS-related genes in the planarian ESTs: representative clones
Clone ID Frequency GenBank accession no. Protein with the best E value E value
A. Neurotransmission (42)
    00382_HN 1 NP_036651.1 Calcium/calmodulin-dependent protein kinase type II δ chain (Rattus norvegicus) 1.00E-73
    01517_HH 1 BAA90484.1 High-affinity choline transporter CHT1 (R. norvegicus) 3.00E-40
    04307_HH 1 AAD32697.1 Putative nicotinic acetylcholine receptor α 7-1 subunit (Heliothis virescens) 9.00E-19
    06065_HH 1 NP_004701.1 Synaptogyrin 2 (H. sapiens) 1.00E-31
    06173_HH 1 Q18179 Putative neuropeptide Y receptor (C. elegans) 2.00E-19
B. Neural network (33)
    00944_HH 1 P16170 Neural cell adhesion molecule precursor (Xenopus laevis) 4.00E-05
    05189_HH 1 AAC83376.1 Netrin precursor (Hirudo medicinalis) 2.00E-48
    06563_HH 1 NP_061241.1 SemaF cytoplasmic domain associated protein 1 (Mus musculus) 7.00E-23
    06717_HH 1 AAF71926.1 Dscam (D. melanogaster) 8.00E-05
    06802_HH 1 A46194 Neurofilament protein NF-220, high-molecular-weight spliced form (Loligo pealei) 8.00E-19
C. Brain morphogenesis-neural differentiation (21)
    00868_HN 1 AAB39211.1 Mutant cysteine-rich FGF receptor (Gallus gallus) 1.00E-15
    01362_HH 1 AAF21645.1 Frizzled homolog (Danio rerio) 7.00E-06
    01443_HH 1 BAA92185.1 β-catenin (Ciona intestinalis) 7.00E-08
    03592_HH 1 AAD43133.1 Noggin 2 (Danio rerio) 3.00E-14
    05855_HH 1 BAA22437.1 BMP receptor (X. laevis) 7.00E-32
D. Sensory system (11)
    00251_HH 1 NP_004032.1 β-arrestin 1A (H. sapiens) 2.00E-32
    00287_HN 2 Q01062 cGMP-dependent 3′,5′-cyclic phosphodiesterase (R. norvegicus) 4.00E-47
    01791_HH 1 AAC67569.1 Cone transducin α subunit (Ambystoma tigrinum) 6.00E-34
    01997_HH 1 NP_038559.1 Transducin beta chain 4 (M. musculus) 8.00E-31
    06472_HH 1 P24603 Rhodopsin (Loligo forbesi) 6.00E-08
E. Others (9)
    01279_HH 1 JE0209 Brain-specific angiogenesis inhibitor-associated protein 1 (H. sapiens) 1.00E-21
    01704_HH 7 JC5759 Brain-specific serine proteinase (M. musculus) 7.00E-19
    02467_HH 1 015442 Adult brain protein 239 (H. sapiens) 4.00E-39
    05177_HH 1 AAF14284.1 Neural polypyrimidine tract binding protein (H. sapiens) 9.00E-17
    05723_HH 1 BAA35092.1 Neural specific sr protein NSSR 1 (M. musculus) 2.00E-15