Table 2

cDNA-SSCP analysis of homoeologous gene pair expression in 10 organs of G. hirsutum

GeneLeaf Root Stem Cot. Bract Petal Stamen Carpel 10d ov. 20d ov. gDNA
At, DtAt, DtAt, DtAt, DtAt, DtAt, DtAt, DtAt, DtAt, DtAt, DtAt, Dt
adhA (1)35, 6565, 3556, 4466, 3435, 650, 1000, 100100, 00, 10064, 3651, 49
adhA (2)35, 6562, 3864, 3671, 2942, 580, 1000, 100100, 00, 10067, 3350, 50
adhD (1)94, 692, 880, 1191, 9100, 097, 319, 8184, 1687, 1389, 1141, 59
adhD (2)91, 994, 694, 688, 12100, 092, 822, 7886, 1491, 998, 244, 56
A1520 (1)20, 8038, 6243, 5732, 6833, 6753, 4766, 3468, 3257, 4362, 3852, 48
A1520 (2)20, 8047, 5338, 6253, 4763, 3762, 3852, 4850, 50
adhE 7, 934, 966, 947, 9322, 789, 910, 1000, 100
myb1 62, 3844, 5642, 5882, 1866, 3466, 3455, 4562, 3846, 5442, 5850, 50
G811, 8913, 8729, 7124, 769, 9132, 6848, 5243, 5724, 7646, 5450, 50
D566, 3472, 2863, 3771, 2971, 2959, 4159, 4153, 47
D751, 4923, 7739, 6149, 5153, 4746, 5441, 5955, 4559, 4147, 5348, 52
G770, 3061, 3942, 5869, 3175, 2514, 8632, 6851, 49
B560, 400, 10043, 5749, 51
G126261, 3987, 1356, 44
  • At and Dt values represent the percentage of transcripts derived from the At genome and Dt genome, respectively, of allotetraploid G. hirsutum. Cot, cotyledon; ov, ovule. Dashes indicate expression ratio not determined. Numbers in parentheses indicate replicates. Gene names correspond with Table 1