Table 3.

Similarity-based OTUs and species richness estimates

Sample IDReadsCluster distance
0.03
0.05
0.10
OTUACEChao1OTUACEChao1OTUACEChao1
53R5,0001,9467,2476,9971,7325,6165,2881,3163,3513,018
55R13,9025,26619,23518,1914,67314,95914,2093,6449,6189,080
112R9,2824,24116,00213,7723,77012,34110,8702,9588,0117,108
115R11,0054,00012,76711,2963,4139,1898,5852,4575,5535,448
13713,9074,55413,69811,9913,8669,7348,7052,7085,3535,181
13814,3745,13618,65616,6004,50813,85212,4243,2937,5966,941
FS3124,8351,9415,5995,4821,6814,2334,0801,2272,4662,346
FS39617,6666,32623,31520,9495,57318,00316,8894,29111,52010,567
  • The species richness estimates were determined by using the program DOTUR as described in Methods.