Table 1

Examples of identified proteins

Identification no.NameRatio
Raft proteins (>7.5)
P08174CD55>10
P07948Lyn tyrosine kinase>10
 Q969J8Flotillin 1>10
P15328Folate receptor>10
P05186Alkaline phosphatase>10
O00161SNAP-23>10
P27105Stomatin>10
P215895′-nucleotidase>10
Gsα1, G, Goα2, Giα1, Giα2, Giα3, Gα11, Gα12, Gα13, Gβ1, Gβ2, Gβ4, Gγ12>10
P07947YES tyrosine kinase>10
 Q9NV17Hypothetical protein FLJ10709>10
Q14699KIAA0084>10
P18206Vinculin9.4  ± 0.1
 Q8WWV8Scribble>10
P14923Plakoglobin 1>10
 Q9Z0J8Kilon>10
 Q9BZM4ULBP38.2  ± 0.7
Raft-associated proteins (7.5 < × < 3.0)
Q03135Caveolin-13.3  ± 0.4
P38606V-ATPase A5.3  ± 0.8
P21281V-ATPase B4.3  ± 0.4
P21283V-ATPase C5.2  ± 0.7
 Q9Y5K8V-ATPase D4.4*
O75348V-ATPase G6.3  ± 0.3
 Q9U112V-ATPase H4.3  ± 0.7
Q15904V-ATPase S13.4  ± 0.4
P2931214-3-3ζ/δ5.5*
P11233RalA4.6  ± 0.9
 P082389HSP-90β4.7  ± 0.5
O94905Chromosome 8 ORF 24.9  ± 1.2
 Q9UHA4MEK binding partner 14.4  ± 0.5
 Q9Y3U1Hypothetical 66.9 kDa protein6.2  ± 0.4
 Q9Y490Talin5.0  ± 1.3
Q14642Inositol-1,4,5-P3 5-phosphatase5.4*
Nonspecific proteins (<3.0)
Q16891Mitofilin, mitochondria2.1*
P02786Transferrin receptor2.7  ± 0.2
P21796VDAC1, mitochondria1.3  ± 0.1
P45880VDAC2, mitochondria1.5  ± 0.4
O00410Nuclear importin-31.5  ± 0.3
P12236Mitochondrial adenine translocator1.6  ± 0.3
O95613Pericentrin 2, nuclear1.1*
P04843Ribophorin I1.4  ± 0.1
Q92896E-selectin1.6  ± 0.2
  • SWISS-PROT/TrEMBL identifiers, protein names, and control/MβCD ratios (±SE) for selected proteins. 

  • * Ratio based on one peptide.