Table S3.

E. coli strains in 32-genome Mauve multiple alignment

GroupStrainGenBankComplete genomeBasic genomeba/cg,%ba/32,%Reconfigured for alignment
AMG1655U00096.24,639,6753,917,10784.499.0
AB-DLDataset S84,620,7783,892,82484.298.4
AHSCP000802.14,643,5383,884,96883.798.2
AP12bCP002291.14,935,2943,901,78579.198.61.2-Mbp invert btw IS3s
ACrooks (ATCC 8739)CP000946.14,746,2183,914,31582.599.0Invert and rotate
GUMNF18AGTD01000001.15,239,2073,920,48474.899.1
AETEC H10407FN649414.15,153,4353,912,68775.998.9
AUMNK88CP002729.15,186,4163,927,26575.799.3
B1WCP002185.14,900,9683,930,42880.299.4
B155989CU928145.25,154,8623,914,83175.999.0Rotate
B1O26:H11 str. 11368NC_013361.15,697,2403,912,18168.798.9471- and 5.3-kbp inverts
B1O111:H- str. 11128AP010960.15,371,0773,910,01072.898.992-kbp invert btw IS129s
B1O103:H2 str. 12009NC_013353.15,449,3143,924,64772.099.2456-kbp invrt w 5 transloc
B1SE11AP009240.14,887,5153,932,90880.599.4
B1E24377ACP000800.14,979,6193,929,45178.999.3
B1IAI1CU928160.24,700,5603,927,74883.699.3
EO55:H7 str. CB9615CP001846.15,386,3523,892,41672.398.4
EO157:H7 str. SakaiNC_002695.15,498,4503,849,03770.097.3
B2SE15AP009378.14,717,3383,783,26580.295.7Invert between asn tRNAs
B2IHE3034CP001969.15,108,3833,799,69574.496.1Invert between asn tRNAs
B2S88CU928161.25,032,2683,808,31875.796.3
B2APEC O1CP000468.15,082,0253,800,60174.896.1Rotate
B2ED1ANC_011745.15,209,5483,739,17871.894.5Rotate, 8.8-kbp invert
B2536CP000247.14,938,9203,797,59376.996.0Invert between asn tRNAs
B2LF82CU651637.14,773,1083,796,69579.596.0Rotate
B2ABU 83972CP001671.15,131,3973,794,74174.095.9Invert between asn tRNAs
B2CFT073AE014075.15,231,4283,784,22272.395.7Invert between asn tRNAs
B2O127:H6 E2348/69FM180568.14,965,5533,779,98476.195.6
DO7:K1 str. CE10CP003034.15,313,5313,903,55773.598.7
DSMS-3-5NC_010498.15,068,3893,911,22677.298.91.4-Mbp invrt btw IS110s
D042FN554766.15,241,9773,879,60574.098.1
DUMN026NC_011751.15,202,0903,888,37374.798.3Rotate
  • Length of filtered 32-genome Mauve multiple alignment: 3,955,192.