Table S2.

Sequencing statistics depicted separately for all samples from each patient

SampleTotal reads% mapped% uniquely mapped% in target basesAverage coverageMedian coverage% bases covered% bases covered >20×
Subject01 - blood55,725,99487.6582.1355.57231.69174.0094.5580.71
Subject01 - organoid40,839,23687.7281.7858.99180.51117.0093.6576.53
Subject01 - tumor89,556,00288.0382.1151.25344.62230.0095.8285.74
Subject02 - blood78,031,55388.4882.4655.59327.50248.0095.4184.21
Subject02 - organoid57,602,21087.3881.4155.31237.68155.0094.8081.20
Subject02 - tumor58,474,52485.9380.1654.31232.86157.0096.1986.96
Subject03 - blood60,117,49687.5182.0555.64249.91190.0094.6881.40
Subject03 - organoid55,752,80088.8783.6055.66235.65160.0094.7580.97
Subject03 - tumor72,388,43086.2680.8455.52296.03248.0096.0787.57
Subject04 - blood59,027,59886.5780.7855.33241.00189.0095.3083.18
Subject04 - organoid42,977,63189.4584.0356.05184.11106.0094.3678.99
Subject04 - tumor20,034,39679.8773.2041.3056.4631.0089.0159.71
Subject05 - blood58,658,78987.1281.2253.58233.41181.0094.8981.71
Subject05 - organoid45,661,47488.4082.3754.46187.51144.0094.8780.89
Subject05 - tumor51,527,86988.0782.2456.14217.18157.0094.5781.14
Subject06 - blood62,923,61579.6774.2754.87234.91195.0094.6883.73
Subject06 - organoid24,908,88468.3462.2745.0365.4842.0094.4570.95
Subject06 - tumor61,725,20763.9859.6856.61190.95132.0093.6379.90
Subject07 - blood66,097,55282.2276.9558.13269.70226.0095.1585.49
Subject07 - organoid65,525,83179.3474.3659.96266.39201.0094.9984.86
Subject07 - tumor41,859,37276.2971.4260.34164.69132.0094.5482.40
Subject08 - blood57,698,76978.8773.7859.47231.04188.0095.1984.77
Subject08 - organoid55,896,26875.5970.7360.17217.12162.0094.6782.34
Subject08 - tumor49,018,89776.0071.1860.87193.64156.0094.6882.79